Query: NC_004347:3197219 Shewanella oneidensis MR-1, complete genome
Start: 3197219, End: 3221825, Length: 24607
Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria
General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_008577:1690946* | 1690946 | 1714438 | 23493 | Shewanella sp. ANA-3 chromosome 1, complete sequence | 0 | 6250 | BLASTN svg | BLASTP svg |
| NC_008321:1636148* | 1636148 | 1659767 | 23620 | Shewanella sp. MR-4, complete genome | 0 | 5392 | BLASTN svg | BLASTP svg |
| NC_008322:1708631* | 1708631 | 1731142 | 22512 | Shewanella sp. MR-7, complete genome | 0 | 5360 | BLASTN svg | BLASTP svg |
| NC_009052:3229775 | 3229775 | 3254441 | 24667 | Shewanella baltica OS155, complete genome | 0 | 2833 | BLASTN svg | BLASTP svg |
| NC_008345:3199965 | 3199965 | 3226063 | 26099 | Shewanella frigidimarina NCIMB 400, complete genome | 3e-157 | 563 | BLASTN svg | BLASTP svg |
| NC_009901:3148901 | 3148901 | 3174373 | 25473 | Shewanella pealeana ATCC 700345, complete genome | 5e-125 | 456 | BLASTN svg | BLASTP svg |
| NC_009092:2833865 | 2833865 | 2860272 | 26408 | Shewanella loihica PV-4, complete genome | 2e-99 | 371 | BLASTN svg | BLASTP svg |
| NC_010334:3224009 | 3224009 | 3244173 | 20165 | Shewanella halifaxensis HAW-EB4, complete genome | 9e-99 | 369 | BLASTN svg | BLASTP svg |
| NC_008700:2607526 | 2607526 | 2631538 | 24013 | Shewanella amazonensis SB2B, complete genome | 8e-50 | 206 | BLASTN svg | BLASTP svg |
| NC_009348:2034500* | 2034500 | 2057599 | 23100 | Aeromonas salmonicida subsp. salmonicida A449, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
| NC_013416:1526920 | 1526920 | 1545636 | 18717 | Aggregatibacter actinomycetemcomitans D11S-1, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_011083:2542876 | 2542876 | 2568855 | 25980 | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476, | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_013959:826868 | 826868 | 872099 | 45232 | Sideroxydans lithotrophicus ES-1 chromosome, complete genome | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_005140:444353 | 444353 | 465186 | 20834 | Vibrio vulnificus YJ016 chromosome II, complete sequence | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_004460:1718088 | 1718088 | 1739885 | 21798 | Vibrio vulnificus CMCP6 chromosome II, complete sequence | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |