Pre_GI: BLASTN Hits

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Query: NC_004347:3197219 Shewanella oneidensis MR-1, complete genome

Start: 3197219, End: 3221825, Length: 24607

Host Lineage: Shewanella oneidensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from Oneida lake in New York, USA. Potential bioremediation organism. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This organism is a facultative anaerobe that is capable of using a wide variety of terminal electron acceptors during anaerobic respiration which may make it valuable for bioremediation. Since the bacteria can reduce chromium and uranium from the liquid phase to form insoluble compounds, they may be used to eliminate these two environmental pollutants from water.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009348:2034500*2034500205759923100Aeromonas salmonicida subsp. salmonicida A449, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_013416:15269201526920154563618717Aggregatibacter actinomycetemcomitans D11S-1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011083:25428762542876256885525980Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,2e-1075.8BLASTN svgBLASTP svg
NC_008700:26075262607526263153824013Shewanella amazonensis SB2B, complete genome8e-50206BLASTN svgBLASTP svg
NC_009052:32297753229775325444124667Shewanella baltica OS155, complete genome02833BLASTN svgBLASTP svg
NC_008345:31999653199965322606326099Shewanella frigidimarina NCIMB 400, complete genome3e-157563BLASTN svgBLASTP svg
NC_010334:32240093224009324417320165Shewanella halifaxensis HAW-EB4, complete genome9e-99369BLASTN svgBLASTP svg
NC_009092:28338652833865286027226408Shewanella loihica PV-4, complete genome2e-99371BLASTN svgBLASTP svg
NC_009901:31489013148901317437325473Shewanella pealeana ATCC 700345, complete genome5e-125456BLASTN svgBLASTP svg
NC_008577:1690946*1690946171443823493Shewanella sp. ANA-3 chromosome 1, complete sequence06250BLASTN svgBLASTP svg
NC_008321:1636148*1636148165976723620Shewanella sp. MR-4, complete genome05392BLASTN svgBLASTP svg
NC_008322:1708631*1708631173114222512Shewanella sp. MR-7, complete genome05360BLASTN svgBLASTP svg
NC_013959:82686882686887209945232Sideroxydans lithotrophicus ES-1 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_004460:17180881718088173988521798Vibrio vulnificus CMCP6 chromosome II, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_005140:44435344435346518620834Vibrio vulnificus YJ016 chromosome II, complete sequence1e-0869.9BLASTN svgBLASTP svg