Pre_GI: BLASTN Hits

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Query: NC_003911:3864852 Silicibacter pomeroyi DSS-3, complete genome

Start: 3864852, End: 3898296, Length: 33445

Host Lineage: Ruegeria pomeroyi; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: Formerly Silicibacter pomeroyi, his marine bacterium is a member of the Roseobacter clade and was isolated off of the coast of Georgia in 1998. Dimethylsulfoniopropionate-degrading bacterium. Capable of degrading the organic sulfur compound DMSP (dimethylsulfoniopropionate) and can metabolize a number of sulfur compounds. DMSP is synthesized by marine algae and the degradation product dimethylsulfide contributes to the global sulfur cycle.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_006569:69939*6993910335033412Silicibacter pomeroyi DSS-3 megaplasmid, complete sequence01643BLASTN svgBLASTP svg
NC_003911:28994352899435292004820614Silicibacter pomeroyi DSS-3, complete genome01631BLASTN svgBLASTP svg
NC_003911:25404532540453256752127069Silicibacter pomeroyi DSS-3, complete genome0710BLASTN svgBLASTP svg
NC_008043:86470*8647010848022011Silicibacter sp. TM1040 mega plasmid, complete sequence4e-71278BLASTN svgBLASTP svg
NC_008686:405159*40515944047735319Paracoccus denitrificans PD1222 chromosome 1, complete sequence2e-39172BLASTN svgBLASTP svg
NC_003911:1791878*1791878185265460777Silicibacter pomeroyi DSS-3, complete genome5e-30141BLASTN svgBLASTP svg
NC_007794:15530001553000157259919600Novosphingobium aromaticivorans DSM 12444, complete genome8e-29137BLASTN svgBLASTP svg
NC_008686:1960034*1960034199164331610Paracoccus denitrificans PD1222 chromosome 1, complete sequence2e-26129BLASTN svgBLASTP svg
NC_007802:3575739*3575739362449148753Jannaschia sp. CCS1, complete genome3e-25125BLASTN svgBLASTP svg
NC_015259:2757081*2757081278813031050Polymorphum gilvum SL003B-26A1 chromosome, complete genome7e-20107BLASTN svgBLASTP svg
NC_008687:133728*13372816046226735Paracoccus denitrificans PD1222 chromosome 2, complete sequence5e-18101BLASTN svgBLASTP svg
NC_008686:2080770*2080770210441423645Paracoccus denitrificans PD1222 chromosome 1, complete sequence5e-18101BLASTN svgBLASTP svg
NC_016027:19028541902854193735834505Gluconacetobacter xylinus NBRC 3288, complete genome7e-1797.6BLASTN svgBLASTP svg
NC_016027:13576591357659140149643838Gluconacetobacter xylinus NBRC 3288, complete genome7e-1797.6BLASTN svgBLASTP svg
NC_016027:1851737*1851737188759935863Gluconacetobacter xylinus NBRC 3288, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_016027:12385312385315601332161Gluconacetobacter xylinus NBRC 3288, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_016027:2047954*2047954211021762264Gluconacetobacter xylinus NBRC 3288, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_020911:30767913076791310197525185Octadecabacter antarcticus 307, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_010125:24831222483122251620333082Gluconacetobacter diazotrophicus PAl 5, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_007493:207932*20793223466126730Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence4e-1281.8BLASTN svgBLASTP svg
NC_014034:2899120*2899120292265123532Rhodobacter capsulatus SB1003 chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_011770:18118741811874183622424351Pseudomonas aeruginosa LESB58, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_008463:17564341756434177764821215Pseudomonas aeruginosa UCBPP-PA14, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_015947:19373411937341196618728847Burkholderia sp. JV3 chromosome, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_004129:5204500*5204500522581521316Pseudomonas fluorescens Pf-5, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_005773:4028500*4028500405209923600Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_014664:26695622669562269113921578Rhodomicrobium vannielii ATCC 17100 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_015499:1403447*1403447142823724791Thermodesulfobium narugense DSM 14796 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_010688:28501642850164287100220839Xanthomonas campestris pv. campestris, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_007493:628243*62824365684428602Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence3e-0765.9BLASTN svgBLASTP svg
NC_021150:3505234*3505234352968724454Azotobacter vinelandii CA6, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_012560:3505235*3505235352968824454Azotobacter vinelandii DJ, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_015161:523278*52327854807924802Deinococcus proteolyticus MRP chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg