Pre_GI: BLASTN Hits

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Query: NC_002976:638799 Staphylococcus epidermidis RP62A, complete genome

Start: 638799, End: 662648, Length: 23850

Host Lineage: Staphylococcus epidermidis; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: This strain is a strongly adherent, slime-producing, pathogenic strain isolated from a patient with intravascular catheter-associated sepsis. Common skin bacterium. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is the most prevalent and persistent Staphylococcus species on human skin. Has emerged as a common cause of nosocomial (hospital-acquired) infections, including catheter-associated infections and septicemia, particularly in immunocompromised patients. Highly resistant to many antibiotics including penicillins and cephalosporins.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004461:74628474628477013223849Staphylococcus epidermidis ATCC 12228, complete genome029230BLASTN svgBLASTP svg
NC_020164:17842231784223180548221260Staphylococcus warneri SG1, complete genome02210BLASTN svgBLASTP svg
NC_007168:19237231923723194369919977Staphylococcus haemolyticus JCSC1435, complete genome01449BLASTN svgBLASTP svg
NC_011999:72835372835376039632044Macrococcus caseolyticus JCSC5402, complete genome5e-20107BLASTN svgBLASTP svg
NC_018704:43340243340245651923118Amphibacillus xylanus NBRC 15112, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_003030:15100001510000154543435435Clostridium acetobutylicum ATCC 824, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010718:46440546440548434419940Natranaerobius thermophilus JW/NM-WN-LF, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_004193:78395878395880200618049Oceanobacillus iheyensis HTE831, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_006814:15381751538175156256724393Lactobacillus acidophilus NCFM, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_004668:3184319*3184319321199927681Enterococcus faecalis V583, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008262:784878*78487882991045033Clostridium perfringens SM101, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_003366:84200084200086047418475Clostridium perfringens str. 13, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_010380:12465512465515098226328Streptococcus pneumoniae Hungary19A-6, complete genome2e-0765.9BLASTN svgBLASTP svg