Pre_GI Gene

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Host: NC_006814 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006814:1538175 Lactobacillus acidophilus NCFM, complete genome

Host Lineage: Lactobacillus acidophilus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This organism is a normal inhabitant of the human intestinal tract. This strain was isolated from a human in 1970. Normal gastrointestinal bacterium. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. This organism has been studied for its ability to help the human gut maintain its natural microbial community. Strains of this organism are also used in the production of yogurt, cheese and other fermented foods.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
15373361538176841formamidopyrimidine-DNA glycosylase FpgQuickGO ontology
153817515408472673DNA polymerase IQuickGO ontologyBLASTP
154323415445051272phosphoribosylamine-glycine ligaseQuickGO ontologyBLASTP
154451815460591542phosphoribosylaminoimidazolecarboxamide formyltransferaseQuickGO ontologyBLASTP
15460561546667612phosphoribosyl glycinamide formyltransferaseQuickGO ontologyBLASTP
154666815477051038phosphoribosylaminoimidazole synthetaseQuickGO ontologyBLASTP
154770815491741467phosphoribosylpyrophosphate amidotransferaseQuickGO ontologyBLASTP
154913215513602229phosphoribosylformylglycinamidine synthaseQuickGO ontologyBLASTP
15513571552028672phosphoribosylformylglycinamidine synthaseQuickGO ontologyBLASTP
15520251552279255putative phosphoribosylformylglycinamidine FGAM synthaseQuickGO ontologyBLASTP
15522801553009730phosphoribosylaminoimidazole- succinocarboxamidesynthaseQuickGO ontology
155320115542901090phosphoribosylaminoimidazole carboxylaseQuickGO ontology
15543421554840499phosphoribosylaminoimidazole carboxylaseQuickGO ontology
155484515565161672formate-tetrahydrofolate ligaseQuickGO ontology
15566931557377685putative flavodoxinQuickGO ontology
15575141558408895hypothetical protein
15584131558733321putative DNA-damage-inducible protein JQuickGO ontology
15588481559839992bacteriocin helveticin JQuickGO ontology
155995415614851532aminopeptidaseQuickGO ontology
156149815625671070putative surface proteinQuickGO ontology