Pre_GI: BLASTN Hits

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Query: NC_002929:2589202 Bordetella pertussis Tohama I, complete genome

Start: 2589202, End: 2612099, Length: 22898

Host Lineage: Bordetella pertussis; Bordetella; Alcaligenaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was originally isolated from a patient with whooping cough and has been studied extensively for over 40 years. Causative agent of whooping cough. This group of organisms is capable of invading the respiratory tract of animals and causing severe diseases. They express a number of virulence factors in order to do this including filamentous hemagglutins for attachment, cytotoxins, and proteins that form a type III secretion system for transport of effector molecules into host cells. This organism, which is unable to persist in the environment, is a strict human pathogen that causes whooping cough. Once a common cause of death in children the development of a vaccine has greatly decreased the number of deaths due to Bordetella pertussis. However, this organism infects and estimated 39 million people and kills hundreds of thousands of people each year.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002927:4130697*4130697415192921233Bordetella bronchiseptica RB50, complete genome029670BLASTN svgBLASTP svg
NC_002928:3715492*3715492373400118510Bordetella parapertussis 12822, complete genome025840BLASTN svgBLASTP svg
NC_002929:52500*525008147528976Bordetella pertussis Tohama I, complete genome02038BLASTN svgBLASTP svg
NC_002929:3305682*3305682333485129170Bordetella pertussis Tohama I, complete genome02038BLASTN svgBLASTP svg
NC_002929:3568106*3568106359523227127Bordetella pertussis Tohama I, complete genome02022BLASTN svgBLASTP svg
NC_010943:20911992091199211510023902Stenotrophomonas maltophilia K279a, complete genome8e-53216BLASTN svgBLASTP svg
NC_011071:18775001877500190261425115Stenotrophomonas maltophilia R551-3, complete genome2e-50208BLASTN svgBLASTP svg
NC_009074:2914053*2914053293925825206Burkholderia pseudomallei 668 chromosome I, complete sequence3e-24121BLASTN svgBLASTP svg
NC_008380:4968492*4968492498809919608Rhizobium leguminosarum bv. viciae 3841, complete genome3e-18101BLASTN svgBLASTP svg
NC_007925:138927*13892717109932173Rhodopseudomonas palustris BisB18, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_008435:604772*60477264849843727Rhodopseudomonas palustris BisA53, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_009720:216589*21658924097524387Xanthobacter autotrophicus Py2, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_013446:4281250*4281250430762526376Comamonas testosteroni CNB-2, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_013446:2237854*2237854227259934746Comamonas testosteroni CNB-2, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_008061:21068482106848213789431047Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence1e-1489.7BLASTN svgBLASTP svg
NC_008543:12767512767515311825444Burkholderia cenocepacia HI2424 chromosome 2, complete sequence1e-1489.7BLASTN svgBLASTP svg
NC_010515:26910002691000272570834709Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence1e-1489.7BLASTN svgBLASTP svg
NC_015856:3170771*3170771319449023720Collimonas fungivorans Ter331 chromosome, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_015422:1116359*1116359114310426746Alicycliphilus denitrificans K601 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_009648:22527572252757228316130405Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_002678:3210751*3210751323209921349Mesorhizobium loti MAFF303099, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_008781:26550712655071268316628096Polaromonas naphthalenivorans CJ2, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_014923:1249267*1249267127291123645Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete5e-1177.8BLASTN svgBLASTP svg
NC_012559:1228280*1228280127461346334Laribacter hongkongensis HLHK9, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_012483:30784*307848496154178Acidobacterium capsulatum ATCC 51196, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_010515:11242981124298115292928632Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_015563:3979500*3979500400273623237Delftia sp. Cs1-4 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010512:95152795152797635724831Burkholderia cenocepacia MC0-3 chromosome 3, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_000911:240863*24086326409923237Synechocystis sp. PCC 6803, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008781:3508784*3508784353338924606Polaromonas naphthalenivorans CJ2, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010682:2642269*2642269266509922831Ralstonia pickettii 12J chromosome 1, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_012856:2266187*2266187228576319577Ralstonia pickettii 12D chromosome 1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009050:567209*56720959401626808Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequence7e-0763.9BLASTN svgBLASTP svg
NC_007494:1*12004420044Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence7e-0763.9BLASTN svgBLASTP svg
NC_003869:14153*141533317319021Thermoanaerobacter tengcongensis MB4, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_005085:1269787*1269787132843458648Chromobacterium violaceum ATCC 12472, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007643:791500*79150081271221213Rhodospirillum rubrum ATCC 11170, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014931:5088125*5088125512272134597Variovorax paradoxus EPS chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015161:162000*16200018601224013Deinococcus proteolyticus MRP chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002927:43927684392768441559922832Bordetella bronchiseptica RB50, complete genome3e-0661.9BLASTN svgBLASTP svg