Pre_GI: BLASTN Hits

Some Help

Query: NC_002927:2636694 Bordetella bronchiseptica RB50, complete genome

Start: 2636694, End: 2659364, Length: 22671

Host Lineage: Bordetella bronchiseptica; Bordetella; Alcaligenaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from a rabbit. Causes a respiratory illness in animals. This group of organisms is capable of invading the respiratory tract of animals and causing severe diseases. They express a number of virulence factors in order to do this including filamentous hemagglutinins for attachment, cytotoxins, and proteins that form a type III secretion system for transport of effector molecules into host cells. Bordetella bronchiseptica, which is one of the few Bordetella that is capable of persisting in the environment, is rarely found in humans and is often associated with animals. This organism cause respiratory disease most commonly in pigs, rabbits and dogs.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010170:4196197*4196197422572429528Bordetella petrii, complete genome01419BLASTN svgBLASTP svg
NC_010170:4800000*48000004908823108824Bordetella petrii, complete genome5e-97363BLASTN svgBLASTP svg
NC_008027:55333115533311555523921929Pseudomonas entomophila L48, complete genome7e-47196BLASTN svgBLASTP svg
NC_011992:22797522279752232691047159Acidovorax ebreus TPSY, complete genome1e-45192BLASTN svgBLASTP svg
NC_011662:23749552374955239350718553Thauera sp. MZ1T, complete genome1e-42182BLASTN svgBLASTP svg
NC_008782:13080071308007132716219156Acidovorax sp. JS42, complete genome3e-40174BLASTN svgBLASTP svg
NC_014910:465980*46598050776541786Alicycliphilus denitrificans BC chromosome, complete genome3e-40174BLASTN svgBLASTP svg
NC_021150:18238741823874184285118978Azotobacter vinelandii CA6, complete genome1e-39172BLASTN svgBLASTP svg
NC_012560:18238611823861184283818978Azotobacter vinelandii DJ, complete genome1e-39172BLASTN svgBLASTP svg
NC_003295:659837*65983768202922193Ralstonia solanacearum GMI1000, complete genome4e-36161BLASTN svgBLASTP svg
NC_008390:235155*23515525345118297Burkholderia cepacia AMMD chromosome 1, complete sequence6e-35157BLASTN svgBLASTP svg
NC_010622:249625*24962530832658702Burkholderia phymatum STM815 chromosome 1, complete sequence2e-34155BLASTN svgBLASTP svg
NC_006350:3865584*3865584389809932516Burkholderia pseudomallei K96243 chromosome 1, complete sequence4e-33151BLASTN svgBLASTP svg
NC_008573:19531719531724745052134Shewanella sp. ANA-3 plasmid 1, complete sequence6e-32147BLASTN svgBLASTP svg
NC_008345:41078474107847413795830112Shewanella frigidimarina NCIMB 400, complete genome6e-32147BLASTN svgBLASTP svg
NC_007484:3035068*3035068305935824291Nitrosococcus oceani ATCC 19707, complete genome4e-30141BLASTN svgBLASTP svg
NC_014117:132524*13252417885446331Burkholderia sp. CCGE1002 chromosome chromosome 1, complete4e-30141BLASTN svgBLASTP svg
NC_007434:13225001322500135459932100Burkholderia pseudomallei 1710b chromosome I, complete sequence1e-29139BLASTN svgBLASTP svg
NC_008825:31611463161146318336522220Methylibium petroleiphilum PM1, complete genome6e-29137BLASTN svgBLASTP svg
NC_009512:56325915632591568653153941Pseudomonas putida F1, complete genome3e-27131BLASTN svgBLASTP svg
NC_007651:3560652*3560652359749336842Burkholderia thailandensis E264 chromosome I, complete sequence3e-27131BLASTN svgBLASTP svg
NC_009434:69558269558276739471813Pseudomonas stutzeri A1501, complete genome2e-25125BLASTN svgBLASTP svg
NC_013854:3200912*3200912322443023519Azospirillum sp. B510, complete genome5e-20107BLASTN svgBLASTP svg
NC_007508:2941889*2941889296435422466Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome2e-19105BLASTN svgBLASTP svg
NC_008570:30132633013263304329130029Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome3e-18101BLASTN svgBLASTP svg
NC_014910:24284524284528559942755Alicycliphilus denitrificans BC chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_003296:55683655683661181954984Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete1e-1799.6BLASTN svgBLASTP svg
NC_005085:24572952457295248428326989Chromobacterium violaceum ATCC 12472, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_019974:1184871*1184871127279187921Natronococcus occultus SP4, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_011958:92378992378995236428576Rhodobacter sphaeroides KD131 chromosome 2, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_014910:2015627*2015627203840722781Alicycliphilus denitrificans BC chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_006350:1084930*1084930112191036981Burkholderia pseudomallei K96243 chromosome 1, complete sequence1e-1489.7BLASTN svgBLASTP svg
NC_016002:2825017*2825017284854323527Pseudogulbenkiania sp. NH8B, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_015740:2692023*2692023271734525323Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete2e-1385.7BLASTN svgBLASTP svg
NC_012803:19809551980955200418223228Micrococcus luteus NCTC 2665, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007494:86790186790189976631866Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequence2e-1385.7BLASTN svgBLASTP svg
NC_013204:23714992371499240814536647Eggerthella lenta DSM 2243, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_009075:587441*58744162177434334Burkholderia pseudomallei 668 chromosome II, complete sequence3e-1281.8BLASTN svgBLASTP svg
NC_013446:28200002820000286592045921Comamonas testosteroni CNB-2, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_010407:316320*31632033498318664Clavibacter michiganensis subsp. sepedonicus chromosome, complete1e-1179.8BLASTN svgBLASTP svg
NC_014151:40213944021394406852347130Cellulomonas flavigena DSM 20109 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_009434:3611738*36117383748875137138Pseudomonas stutzeri A1501, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_013201:4500*45002569521196Halomicrobium mukohataei DSM 12286 plasmid pHmuk01, complete2e-1075.8BLASTN svgBLASTP svg
NC_015138:27250027250029566023161Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete7e-1073.8BLASTN svgBLASTP svg
NC_012792:31044331044333292422482Variovorax paradoxus S110 chromosome 2, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_007761:241900*24190026263520736Rhizobium etli CFN 42, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014844:21583182158318217659218275Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007434:24248842424884244820923326Burkholderia pseudomallei 1710b chromosome I, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_008782:15661721566172158601319842Acidovorax sp. JS42, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008786:28507362850736287895428219Verminephrobacter eiseniae EF01-2, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008786:39150003915000394226927270Verminephrobacter eiseniae EF01-2, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009076:20274782027478205048923012Burkholderia pseudomallei 1106a chromosome I, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_011770:28042182804218282883824621Pseudomonas aeruginosa LESB58, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013441:27888062788806282218133376Gordonia bronchialis DSM 43247, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014323:24597924597926763821660Herbaspirillum seropedicae SmR1 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013172:31417393141739316451822780Brachybacterium faecium DSM 4810, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007626:959684*959684100429644613Magnetospirillum magneticum AMB-1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012856:112296322963Ralstonia pickettii 12D chromosome 1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014306:4106569*4106569413417327605Erwinia billingiae Eb661, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014817:1063173*1063173108629123119Asticcacaulis excentricus CB 48 chromosome 2, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_006350:3710641*3710641373649425854Burkholderia pseudomallei K96243 chromosome 1, complete sequence7e-0763.9BLASTN svgBLASTP svg
NC_007645:38704663870466392303252567Hahella chejuensis KCTC 2396, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008726:38582093858209387826620058Mycobacterium vanbaalenii PYR-1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008786:17673151767315179053023216Verminephrobacter eiseniae EF01-2, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008786:38459883845988387218826201Verminephrobacter eiseniae EF01-2, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_009074:3559211*3559211358478825578Burkholderia pseudomallei 668 chromosome I, complete sequence7e-0763.9BLASTN svgBLASTP svg
NC_010557:67965667965674320963554Burkholderia ambifaria MC40-6 chromosome 3, complete sequence7e-0763.9BLASTN svgBLASTP svg
NC_013172:25565172556517257961323097Brachybacterium faecium DSM 4810, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014831:19066911906691195238745697Thermaerobacter marianensis DSM 12885 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015976:2900891*2900891292514524255Sphingobium sp. SYK-6, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_020211:22065002206500222782621327Serratia marcescens WW4, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010338:4530403*4530403455419223790Caulobacter sp. K31, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009480:2932108*2932108295389521788Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete3e-0661.9BLASTN svgBLASTP svg
NC_007925:42944724294472431768023209Rhodopseudomonas palustris BisB18, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007759:2748000*2748000277201124012Syntrophus aciditrophicus SB, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007164:77500077500079726122262Corynebacterium jeikeium K411, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011992:1179084*1179084120383024747Acidovorax ebreus TPSY, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013093:1036772*1036772108759950828Actinosynnema mirum DSM 43827, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013204:929434*92943496906339630Eggerthella lenta DSM 2243, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013947:613774*61377463382720054Stackebrandtia nassauensis DSM 44728 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014121:32359113235911326030624396Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete3e-0661.9BLASTN svgBLASTP svg
NC_014151:13739371373937139470220766Cellulomonas flavigena DSM 20109 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015422:34933963493396351574822353Alicycliphilus denitrificans K601 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_006350:1938631*1938631199668958059Burkholderia pseudomallei K96243 chromosome 1, complete sequence3e-0661.9BLASTN svgBLASTP svg