Pre_GI: BLASTP Hits

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Query: NC_020134:301500:330009 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 330009, End: 331970, Length: 1962

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021182:380500:3962793962793973851107Clostridium pasteurianum BC1, complete genomeputative ABC-type transport system, periplasmic component/surface lipoprotein2e-53211
NC_014328:3294086:3309018330901833101451128Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative basic membrane protein2e-42174
NC_015856:268034:2717072717072728821176Collimonas fungivorans Ter331 chromosome, complete genomeABC transporter periplasmic protein1e-37158
NC_017079:261736:3001123001123013411230Caldilinea aerophila DSM 14535 = NBRC 104270, complete genomeputative basic membrane lipoprotein1e-35152
NC_015931:1653604:1656525165652516579971473Pyrolobus fumarii 1A, complete genomebasic membrane lipoprotein2e-29131
NC_010001:986500:9869949869949881661173Clostridium phytofermentans ISDg, complete genomebasic membrane lipoprotein9e-29129
NC_010725:4618000:4634499463449946355991101Methylobacterium populi BJ001, complete genomebasic membrane lipoprotein5e-28126
NC_014961:335808:3503773503773517621386Desulfurococcus mucosus DSM 2162 chromosome, complete genomenucleoside-binding protein2e-25118
NC_015152:2622000:2638672263867226397271056Spirochaeta sp. Buddy chromosome, complete genomebasic membrane lipoprotein6e-1273.2
NC_007802:1240989:126439612643961265379984Jannaschia sp. CCS1, complete genomebasic membrane lipoprotein5e-1066.6
NC_008312:5637974:5637974563797456390411068Trichodesmium erythraeum IMS101, complete genomebasic membrane lipoprotein1e-0965.9
NC_015138:2270181:2272925227292522739351011Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completebasic membrane lipoprotein2e-0964.7
NC_008277:387811:3952443952443962631020Borrelia afzelii PKo, complete genomehypothetical protein6e-0963.2
NC_008277:387811:3935633935633945821020Borrelia afzelii PKo, complete genomehypothetical protein6e-0963.2
NC_017238:386893:3937993937993948181020Borrelia afzelii PKo chromosome, complete genomebasic membrane family protein6e-0963.2
NC_006156:389152:3936893936893947021014Borrelia garinii PBi chromosome linear, complete sequencebasic membrane protein A8e-0962.8
NC_008570:236500:2403562403562414591104Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomemembrane lipoprotein1e-0862.4
NC_016633:14000:1565215652166531002Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeputative ABC-type transport system, periplasmic component/surface lipoprotein2e-0861.6
NC_013192:469771:4903244903244920961773Leptotrichia buccalis DSM 1135, complete genomehypothetical protein7e-0859.7
NC_014614:1259236:1269724126972412707731050Clostridium sticklandii, complete genomelipoprotein, Bmp family1e-0758.9
NC_008277:387811:3918793918793928981020Borrelia afzelii PKo, complete genomebasic membrane protein A1e-0758.9
NC_017238:386893:3921183921183931371020Borrelia afzelii PKo chromosome, complete genomebasic membrane family protein1e-0758.9
NC_013517:1849912:1878030187803018799431914Sebaldella termitidis ATCC 33386, complete genomehypothetical protein1e-0758.5
NC_013517:1916020:1917862191786219189051044Sebaldella termitidis ATCC 33386, complete genomebasic membrane lipoprotein6e-0756.6
NC_006156:389152:3918113918113928241014Borrelia garinii PBi chromosome linear, complete sequencebasic membrane protein A1e-0655.8
NC_015921:387451:3915193915193925411023Borrelia bissettii DN127 chromosome, complete genomebasic membrane family protein2e-0655.1
NC_016627:1960097:1973970197397019750281059Clostridium clariflavum DSM 19732 chromosome, complete genomeputative ABC-type transport system, periplasmic component/surface lipoprotein3e-0654.3
NC_009012:1901492:1904910190491019059771068Clostridium thermocellum ATCC 27405, complete genomebasic membrane lipoprotein3e-0654.3
NC_006156:389152:3906893906893917141026Borrelia garinii PBi chromosome linear, complete sequencebasic membrane protein B4e-0653.9