Pre_GI: BLASTP Hits

Some Help

Query: NC_020134:1783000:1789423 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 1789423, End: 1789701, Length: 279

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013216:921377:931751931751932029279Desulfotomaculum acetoxidans DSM 771, complete genomeCRISPR-associated protein Cas23e-23107
NC_014150:1423758:142759014275901427874285Brachyspira murdochii DSM 12563 chromosome, complete genomeCRISPR-associated protein Cas21e-1788.2
NC_015571:290355:300641300641300904264Porphyromonas gingivalis TDC60, complete genomeCRISPR-associated Cas2 family protein2e-1477.4
NC_002950:2098454:210431621043162104579264Porphyromonas gingivalis W83, complete genomeCRISPR-associated protein Cas22e-1477.4
NC_016610:2489415:250786425078642508127264Tannerella forsythia ATCC 43037 chromosome, complete genomeCRISPR-associated protein Cas21e-1375.1
NC_016609:5986500:599008859900885990351264Niastella koreensis GR20-10 chromosome, complete genomeCRISPR-associated protein, Cas2 family3e-1270.9
NC_011295:1263500:127696312769631277226264Coprothermobacter proteolyticus DSM 5265, complete genomeCRISPR-associated protein Cas21e-0961.6
NC_009718:1024000:103297710329771033240264Fervidobacterium nodosum Rt17-B1, complete genomeCRISPR-associated Cas2 family protein2e-0960.8
NC_013799:1117750:112508111250811125347267Hydrogenobacter thermophilus TK-6, complete genomeCRISPR-associated protein2e-0754.7
NC_017161:1117741:112493911249391125205267Hydrogenobacter thermophilus TK-6 chromosome, complete genomeCRISPR-associated protein Cas22e-0754.7
NC_010803:483713:498775498775499035261Chlorobium limicola DSM 245, complete genomeCRISPR-associated protein Cas22e-0754.7
NC_015589:3053504:306124130612413061504264Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeCRISPR-associated protein Cas22e-0754.7
NC_021184:823000:832523832523832786264Desulfotomaculum gibsoniae DSM 7213, complete genomeCRISPR-associated endoribonuclease Cas22e-0754.3
NC_012438:776260:788988788988789254267Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeCRISPR-associated protein Cas24e-0753.5
NC_009486:1103915:111022311102231110504282Thermotoga petrophila RKU-1 chromosome, complete genomeCRISPR-associated Cas2 family protein7e-0752.8
NC_019897:3251639:328516932851693285432264Thermobacillus composti KWC4 chromosome, complete genomeCRISPR-associated endoribonuclease Cas21e-0652
NC_014209:2204515:220706922070692207332264Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,CRISPR-associated protein Cas26e-0649.7