Pre_GI: BLASTP Hits

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Query: NC_017986:5867782:5868198 Pseudomonas putida ND6 chromosome, complete genome

Start: 5868198, End: 5869166, Length: 969

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018080:3088866:309571130957113096682972Pseudomonas aeruginosa DK2 chromosome, complete genomecointegrate resolution protein S3e-97355
NC_009656:3127240:316451031645103165481972Pseudomonas aeruginosa PA7 chromosome, complete genomecointegrate resolution protein S3e-97355
NC_008463:3168837:318711031871103188081972Pseudomonas aeruginosa UCBPP-PA14, complete genomeCointegrate resolution protein S3e-97355
NC_018080:3088866:312118031211803122172993Pseudomonas aeruginosa DK2 chromosome, complete genomephage integrase family protein3e-96351
NC_009439:2427120:247785424778542478813960Pseudomonas mendocina ymp, complete genomephage integrase family protein7e-95347
NC_015410:2698572:271550727155072716487981Pseudomonas mendocina NK-01 chromosome, complete genomephage integrase family protein6e-93340
NC_009659:1923925:196707519670751968007933Janthinobacterium sp. Marseille chromosome, complete genomecointegrate resolution protein S4e-89328
NC_009138:1518315:152966615296661530664999Herminiimonas arsenicoxydans, complete genomeunknown prophage; integrase-like protein (Cointegrate resolution protein S) (partial)1e-85317
NC_011662:2374955:238053023805302381471942Thauera sp. MZ1T, complete genomeintegrase family protein8e-83307
NC_009659:1984980:198761919876191988593975Janthinobacterium sp. Marseille chromosome, complete genomecointegrate resolution protein S1e-82306
NC_007508:2756945:2770341277034127716151275Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomecointegrate resolution protein S3e-82305
NC_008750:2332000:2337459233745923387091251Shewanella sp. W3-18-1, complete genomephage integrase family protein7e-81300
NC_020541:2264521:227697222769722277952981Rhodanobacter sp. 2APBS1, complete genomesite-specific recombinase XerC1e-77290
NC_020541:2191600:220585722058572206834978Rhodanobacter sp. 2APBS1, complete genomesite-specific recombinase XerC1e-77290
NC_016147:623666:6367486367486380191272Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeputative phage integrase7e-78290
NC_010501:2511887:253435325343532535288936Pseudomonas putida W619, complete genomeintegrase family protein6e-74277
NC_013166:1341575:135602813560281356969942Kangiella koreensis DSM 16069, complete genomeintegrase family protein7e-70264
NC_007507:101887:123354123354124199846Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,putative cointegrate resolution protein S4e-61234
NC_007507:101887:104425104425105138714Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,putative cointegrate resolution protein S7e-47187
NC_009656:3127240:314265631426563143531876Pseudomonas aeruginosa PA7 chromosome, complete genomecointegrase1e-38160
NC_013958:29548:341623416235157996Nitrosococcus halophilus Nc4 plasmid pNHAL01, complete sequenceintegrase domain protein SAM domain protein3e-38159
NC_016812:258500:2835232835232845601038Sinorhizobium fredii HH103, complete genomeintegrase family protein8e-35147
NC_008573:195317:2039462039462049681023Shewanella sp. ANA-3 plasmid 1, complete sequencephage integrase family protein5e-34145
NC_008739:41793:6420664206653481143Marinobacter aquaeolei VT8 plasmid pMAQU02, complete sequencephage integrase family protein8e-34144
NC_011138:3182807:3198680319868031996901011Alteromonas macleodii 'Deep ecotype', complete genomePhage integrase6e-33141
NC_011894:983572:995769995769996758990Methylobacterium nodulans ORS 2060, complete genomeintegrase family protein4e-28125
NC_013206:21288:386753867539646972Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446integrase family protein5e-22105
NC_007507:101887:104170104170104373204Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,cointegrate resolution protein S fragment2e-1583.2
NC_006672:47610:4761047610490581449Gluconobacter oxydans 621H plasmid pGOX1, complete sequenceIntegrase-like protein7e-1581.6
NC_014159:37920:5369553695548791185Tsukamurella paurometabola DSM 20162 plasmid pTpau01, completeintegrase family protein2e-1480.1
NC_007677:771168:8244758244758265382064Salinibacter ruber DSM 13855, complete genomePhage integrase, N-terminal SAM-like domain protein5e-1479
NC_010511:3674178:372811937281193729042924Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein5e-1479
NC_019012:61360:825028250283473972Fibrella aestuarina BUZ 2 plasmid pFAES01, complete sequenceIntegrase/recombinase xerD-like protein3e-1375.9
NC_012988:2455807:2500951250095125021231173Methylobacterium extorquens DM4, complete genomeintegrase/recombinase protein4e-1375.5
NC_010510:409469:416469416469417404936Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeintegrase family protein5e-1375.5
NC_012988:3288253:330339033033903304355966Methylobacterium extorquens DM4, complete genomeintegrase5e-1375.5
NC_013732:136673:143650143650144639990Spirosoma linguale DSM 74 plasmid pSLIN02, complete sequenceintegrase family protein3e-1273.2
NC_014210:2597000:2611347261134726125881242Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,integrase family protein2e-1067
NC_009621:389181:3891813891813903561176Sinorhizobium medicae WSM419 plasmid pSMED02, complete sequencephage integrase family protein6e-1065.1
NC_003037:1245645:1264010126401012651671158Sinorhizobium meliloti 1021 plasmid pSymA, complete sequencepossible integrase-like protein7e-1065.1
NC_007333:1743890:1790694179069417917251032Thermobifida fusca YX, complete genomeputative integrase/recombinase9e-1064.7
NC_013211:163390:1733131733131748031491Acetobacter pasteurianus IFO 3283-01 plasmid pAPA01-020, completephage DNA recombinase4e-0962.4
NC_017105:163390:1733131733131748031491Acetobacter pasteurianus IFO 3283-01-42C plasmid pAPA42C_020,phage DNA recombinase4e-0962.4
NC_017113:163390:1733131733131748031491Acetobacter pasteurianus IFO 3283-12 plasmid pAPA12-020, completephage DNA recombinase4e-0962.4
NC_017118:163390:1733131733131748031491Acetobacter pasteurianus IFO 3283-03 plasmid pAPA03-020, completephage DNA recombinase4e-0962.4
NC_017122:163390:1733131733131748031491Acetobacter pasteurianus IFO 3283-07 plasmid pAPA07-020, completephage DNA recombinase4e-0962.4
NC_017126:163390:1733131733131748031491Acetobacter pasteurianus IFO 3283-22 plasmid pAPA22-020, completephage DNA recombinase4e-0962.4
NC_017131:163390:1733131733131748031491Acetobacter pasteurianus IFO 3283-26 plasmid pAPA26-020, completephage DNA recombinase4e-0962.4
NC_017149:163390:1733131733131748031491Acetobacter pasteurianus IFO 3283-32 plasmid pAPA32-020, completephage DNA recombinase4e-0962.4
NC_014032:825793:9156479156479177042058Salinibacter ruber M8 chromosome, complete genometyrosine recombinase XerD7e-0961.6
NC_017986:5797044:5815353581535358164681116Pseudomonas putida ND6 chromosome, complete genomephage integrase9e-0961.2
NC_008536:8541267:856873485687348569168435Solibacter usitatus Ellin6076, complete genomehypothetical protein8e-0858.2
NC_010943:2499092:2500946250094625021151170Stenotrophomonas maltophilia K279a, complete genomeputative integrase2e-0756.6
NC_008269:577111:5820615820615832601200Rhodococcus sp. RHA1 plasmid pRHL1, complete sequenceprobable integrase2e-0756.6
NC_017075:2733898:2742785274278527438431059Rubrivivax gelatinosus IL144, complete genomeintegrase family protein3e-0756.2
NC_011071:2207385:2213586221358622146651080Stenotrophomonas maltophilia R551-3, complete genomeintegrase family protein3e-0755.8
NC_011887:110618:1319371319371329981062Methylobacterium nodulans ORS 2060 plasmid pMNOD02, completeintegrase family protein8e-0651.6
NC_010510:388885:3984003984003994611062Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeintegrase family protein8e-0651.6
NC_013235:3129384:313222031322203133188969Nakamurella multipartita DSM 44233, complete genomeintegrase family protein9e-0651.2