Pre_GI: BLASTP Hits

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Query: NC_017506:1100679:1147643 Marinobacter adhaerens HP15 chromosome, complete genome

Start: 1147643, End: 1148761, Length: 1119

Host Lineage: Marinobacter adhaerens; Marinobacter; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Country: Germany; Environment: marine water; Temp: 15C; Habitat: temperate shelf and sea biome; Isolation:German Wadden Sea. The marine bacterium strain HP15 was isolated from the German Wadden Sea. In order to isolate exclusively attached bacteria, aggregates (0.1 to 1 mm in diameter) were collected on a plankton net (0.1 mm pore size) from surface waters of 15 degrees C. Marine aggregates are densely colonized by bacteria from different taxonomic groups. Inter-specific interactions such as inhibition are important for colonization by aggregate-associated bacteria and thus affect the turnover of organic matter in the oceans. Strain HP15 is a colonizing bacterium which belongs to the Alteromonadaceae family within the class Gammaproteobacteria.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015554:3964000:3972604397260439736501047Alteromonas sp. SN2 chromosome, complete genomeRND family efflux transporter MFP subunit2e-74279
NC_008740:443274:489846489846490487642Marinobacter aquaeolei VT8, complete genomesecretion protein HlyD3e-72272
NC_012988:4633930:4664094466409446651461053Methylobacterium extorquens DM4, complete genomemultidrug efflux system protein2e-34147
NC_010172:4185904:4217707421770742187921086Methylobacterium extorquens PA1, complete genomeefflux transporter, RND family, MFP subunit6e-34145
NC_008463:4133700:4146826414682641479411116Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative multidrug efflux gene product2e-32140
NC_009659:1129066:1150710115071011518131104Janthinobacterium sp. Marseille chromosome, complete genomecomponent of multidrug efflux system2e-31136
NC_013421:1696746:1696746169674616978551110Pectobacterium wasabiae WPP163, complete genomeefflux transporter, RND family, MFP subunit1e-30134
NC_012796:3374911:3374911337491133760411131Desulfovibrio magneticus RS-1, complete genomeputative efflux system protein1e-30134
NC_008740:443274:489623489623489844222Marinobacter aquaeolei VT8, complete genome9e-30131
NC_014258:127500:1480171480171491261110Pantoea vagans C9-1 plasmid pPag3, complete sequenceputative RND superfamily transporter membrane- fusion protein1e-29131
NC_010512:110932:1367801367801379041125Burkholderia cenocepacia MC0-3 chromosome 3, complete sequenceefflux transporter, RND family, MFP subunit3e-28126
NC_014500:842493:8455558455558466701116Dickeya dadantii 3937 chromosome, complete genomeRND efflux membrane fusion protein9e-26118
NC_013592:1602242:1601127160112716022451119Dickeya dadantii Ech586, complete genomeefflux transporter, RND family, MFP subunit8e-26118
NC_014306:2442471:2466756246675624678621107Erwinia billingiae Eb661, complete genomeHlyD-family secretion protein8e-25115
NC_003295:3421520:3467878346787834689931116Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSPORT LIPOPROTEIN1e-24114
NC_014311:1635408:1635408163540816365231116Ralstonia solanacearum PSI07 chromosome, complete genomemultidrug efflux protein6e-24112
NC_009720:900884:9229089229089240321125Xanthobacter autotrophicus Py2, complete genomeRND family efflux transporter MFP subunit2e-1996.7
NC_016818:1795576:1840047184004718411381092Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeRND family efflux transporter, MFP subunit4e-1789.4
NC_010524:2761394:2780010278001027811911182Leptothrix cholodnii SP-6, complete genomeefflux transporter, RND family, MFP subunit4e-1789.4
NC_009485:1487485:1510442151044215115181077Bradyrhizobium sp. BTAi1 chromosome, complete genomeRND family mulitdrug efflux protein5e-1789
NC_015563:4583906:4603129460312946043791251Delftia sp. Cs1-4 chromosome, complete genomeRND family efflux transporter MFP subunit8e-1685.1
NC_008782:1277117:1277117127711712782741158Acidovorax sp. JS42, complete genomeefflux transporter, RND family, MFP subunit1e-1584.3
NC_011992:1179084:1179084117908411803371254Acidovorax ebreus TPSY, complete genomeefflux transporter, RND family, MFP subunit2e-1583.6
NC_012791:2622923:2643093264309326442861194Variovorax paradoxus S110 chromosome 1, complete genomeefflux transporter, RND family, MFP subunit3e-1583.2
NC_016818:1795576:1838982183898218400461065Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeRND family efflux transporter, MFP subunit2e-1273.6
NC_009485:1487485:1509330150933015104451116Bradyrhizobium sp. BTAi1 chromosome, complete genomeRND family mulitdrug efflux protein2e-1273.6
NC_009092:521519:5245975245975256791083Shewanella loihica PV-4, complete genomeefflux transporter, RND family, MFP subunit6e-1272
NC_020211:996497:1017106101710610182271122Serratia marcescens WW4, complete genomeRND family efflux transporter MFP subunit2e-1170.9
NC_009052:4335754:4338241433824143393441104Shewanella baltica OS155, complete genomeefflux transporter, RND family, MFP subunit2e-1066.6
NC_013209:1406793:1415877141587714169711095Acetobacter pasteurianus IFO 3283-01, complete genomemultidrug resistance transporter HlyD/EmrA/FusE2e-0963.5
NC_017100:1407804:1416888141688814179821095Acetobacter pasteurianus IFO 3283-03, complete genomemultidrug resistance transporter HlyD/EmrA/FusE2e-0963.5
NC_017108:1406787:1415871141587114169651095Acetobacter pasteurianus IFO 3283-12, complete genomemultidrug resistance transporter HlyD/EmrA/FusE2e-0963.5
NC_017111:1406787:1415871141587114169651095Acetobacter pasteurianus IFO 3283-32, complete genomemultidrug resistance transporter HlyD/EmrA/FusE2e-0963.5
NC_017121:1406787:1415871141587114169651095Acetobacter pasteurianus IFO 3283-07, complete genomemultidrug resistance transporter HlyD/EmrA/FusE2e-0963.5
NC_017125:1407804:1416888141688814179821095Acetobacter pasteurianus IFO 3283-22, complete genomemultidrug resistance transporter HlyD/EmrA/FusE2e-0963.5
NC_017146:1407804:1416888141688814179821095Acetobacter pasteurianus IFO 3283-26, complete genomemultidrug resistance transporter HlyD/EmrA/FusE2e-0963.5
NC_017150:1406793:1415877141587714169711095Acetobacter pasteurianus IFO 3283-01-42C, complete genomemultidrug resistance transporter HlyD/EmrA/FusE2e-0963.5
NC_008577:1489643:1509711150971115108321122Shewanella sp. ANA-3 chromosome 1, complete sequenceefflux transporter, RND family, MFP subunit3e-0860.1
NC_007645:5724000:5727223572722357283051083Hahella chejuensis KCTC 2396, complete genomeMembrane-fusion protein3e-0860.1
NC_008700:2788363:2808408280840828095201113Shewanella amazonensis SB2B, complete genomesecretion protein HlyD2e-0757
NC_009615:919495:9266879266879277181032Parabacteroides distasonis ATCC 8503 chromosome, complete genomecation efflux system protein9e-0755.1
NC_019907:1454554:1454554145455414556031050Liberibacter crescens BT-1 chromosome, complete genomeRND efflux membrane fusion protein1e-0654.3
NC_009092:1504363:1523812152381215249271116Shewanella loihica PV-4, complete genomeefflux transporter, RND family, MFP subunit4e-0652.8
NC_007954:1494291:1497359149735914984711113Shewanella denitrificans OS217, complete genomeSecretion protein HlyD5e-0652.4