Pre_GI: BLASTP Hits

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Query: NC_017269:303500:312369 Vibrio cholerae LMA3984-4 chromosome II, complete sequence

Start: 312369, End: 312773, Length: 405

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016945:370471:388804388804389229426Vibrio cholerae IEC224 chromosome II, complete sequencelipoprotein7e-39158
NC_012583:361241:400273400273400698426Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein7e-39158
NC_009456:787322:863244863244863669426Vibrio cholerae O395 chromosome 1, complete sequenceputative lipoprotein7e-39158
NC_002506:370629:388985388985389410426Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein7e-39158
NC_002506:370629:382198382198382623426Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein2e-36150
NC_009456:787322:900754900754901179426Vibrio cholerae O395 chromosome 1, complete sequenceputative lipoprotein2e-36150
NC_012583:361241:362763362763363188426Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein2e-36150
NC_016945:370471:382017382017382442426Vibrio cholerae IEC224 chromosome II, complete sequencelipoprotein2e-36150
NC_016945:324519:348893348893349318426Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein5e-35146
NC_012583:361241:368639368639369064426Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein5e-35146
NC_009456:787322:894878894878895303426Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein5e-35146
NC_016446:49618:741727417274567396Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein6e-35145
NC_012667:931390:101222010122201012615396Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein6e-35145
NC_012580:353273:377615377615378040426Vibrio cholerae M66-2 chromosome II, complete sequencehypothetical protein8e-34142
NC_012583:361241:413208413208413633426Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein8e-34142
NC_016945:370471:401742401742402167426Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein8e-34142
NC_016446:49618:102492102492102887396Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein1e-33141
NC_012667:931390:983900983900984295396Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein1e-33141
NC_009456:787322:850309850309850704396Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein1e-33141
NC_011753:2018500:203581520358152036234420Vibrio splendidus LGP32 chromosome 1, complete genomehypothetical protein8e-25112
NC_004757:2657490:266748926674892667941453Nitrosomonas europaea ATCC 19718, complete genomehypothetical protein1e-2098.6
NC_015222:1843093:185417118541711854863693Nitrosomonas sp. AL212 chromosome, complete genomehypothetical protein3e-1890.5
NC_017192:1841987:187699018769901877382393Arcobacter sp. L, complete genomehypothetical protein5e-1786.3
NC_016945:370471:389407389407389640234Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein2e-0857.4
NC_002506:370629:389588389588389821234Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein2e-0857.4
NC_016945:370471:413691413691413972282Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein4e-0753.5