Pre_GI: BLASTP Hits

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Query: NC_017265:1715035:1729194 Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,

Start: 1729194, End: 1729697, Length: 504

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014029:2607666:261479726147972615378582Yersinia pestis Z176003 chromosome, complete genomeflagellum biosynthesis transcription activator1e-89328
NC_009381:2009842:201660120166012017182582Yersinia pestis Pestoides F chromosome, complete genometranscriptional activator FlhC1e-89328
NC_010159:2955562:296291829629182963499582Yersinia pestis Angola, complete genomeflagellar transcriptional activator FlhC1e-89328
NC_005810:1976000:198903619890361989620585Yersinia pestis biovar Microtus str. 91001, complete genometranscriptional activator FlhC1e-89328
NC_003143:1880000:189277218927721893356585Yersinia pestis CO92, complete genomeflagellum biosynthesis transcription activator1e-89328
NC_015566:3269469:327051732705173271098582Serratia sp. AS12 chromosome, complete genomeflagellar transcriptional activator FlhC2e-81301
NC_014500:3071764:308923830892383089816579Dickeya dadantii 3937 chromosome, complete genomeflagellar transcriptional activator flhC1e-76285
NC_004547:1873390:193472419347241935302579Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeflagellar transcriptional activator8e-77285
NC_013592:1668092:169598716959871696565579Dickeya dadantii Ech586, complete genomeflagellar transcriptional activator FlhC2e-76284
NC_012917:2971702:298104129810412981619579Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeflagellar transcriptional activator FlhC3e-76283
NC_013421:2004088:201495220149522015530579Pectobacterium wasabiae WPP163, complete genomeflagellar transcriptional activator FlhC4e-76283
NC_012880:1765920:179207917920791792660582Dickeya dadantii Ech703, complete genomeflagellar transcriptional activator FlhC3e-74276
NC_004344:26828:383303833038884555Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein9e-51199
NC_010694:1052722:106299510629951063531537Erwinia tasmaniensis, complete genomeFlagellum biosynthesis transcription activator5e-44176
NC_007973:1821753:183158118315811832222642Ralstonia metallidurans CH34 chromosome 1, complete sequenceflagellar transcriptional activator FlhC2e-40165