Pre_GI: BLASTP Hits

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Query: NC_017259:480656:480656 Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,

Start: 480656, End: 482464, Length: 1809

Host Lineage: Buchnera aphidicola; Buchnera; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: It is believed that the Buchnera provide the essential nutrients the host lacks. Besides a nutritional co-dependence, due to a co-existence of millions of years, Buchnera have lost the ability to produce cell surface components such as lipopolysaccharides. This makes for an obligate endosymbiont relationship between host and Buchnera. Buchnera are prokaryotic cells which belong to the gamma-Proteobacteria, closely related to the Enterobacteriaceae family. Phylogenetic studies using 16S rRNA indicate that the symbiotic relationship was established around 200-250 million years ago. Since Buchnera are closely related to Escherichia coli and Haemophilus influenzae, comparative genomic studies can shed light on the evolutionary mechanisms of intracellular endosymbiosis as well as the different underlying molecular basis between organisms with parasitic behavior and symbionts.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004061:498483:5020345020345038421809Buchnera aphidicola str. Sg (Schizaphis graminum), complete genomeexodeoxyribonuclease V 67 kDa polypeptide4e-111402
NC_010694:3055403:3053556305355630554061851Erwinia tasmaniensis, complete genomeExodeoxyribonuclease V alpha chain4e-65249
NC_008253:2965573:2981289298128929831151827Escherichia coli 536, complete genomeexodeoxyribonuclease V alpha chain1e-61238
NC_013361:3823347:3839171383917138409971827Escherichia coli O26:H11 str. 11368 chromosome, complete genomeexonuclease V subunit alpha1e-61238
NC_011745:3197584:3213407321340732152331827Escherichia coli ED1a chromosome, complete genomeexonuclease V subunit alpha2e-61237
NC_007946:3125577:3141071314107131428971827Escherichia coli UTI89, complete genomeexodeoxyribonuclease V alpha chain2e-61237
NC_007613:2699500:2713369271336927151951827Shigella boydii Sb227, complete genomeATP-dependent dsDNA/ssDNA exonuclease V subunit2e-61237
NC_011742:3057444:3072950307295030747761827Escherichia coli S88 chromosome, complete genomeexonuclease V subunit alpha2e-61237
NC_010498:3023442:3039266303926630410921827Escherichia coli SMS-3-5, complete genomeexodeoxyribonuclease V, alpha subunit3e-61236
NC_007712:3382000:3399933339993334017921860Sodalis glossinidius str. 'morsitans', complete genomeexodeoxyribonuclease V alpha subunit4e-61236
NC_004459:1794540:1794540179454017966542115Vibrio vulnificus CMCP6 chromosome I, complete sequenceATP-dependent exoDNAse alpha subunit1e-41171
NC_011206:2512667:2519649251964925216011953Acidithiobacillus ferrooxidans ATCC 53993, complete genomeexodeoxyribonuclease V, alpha subunit2e-34147
NC_008639:1573971:1590428159042815921731746Chlorobium phaeobacteroides DSM 266, complete genomeexodeoxyribonuclease V, alpha subunit1e-29131
NC_018645:4945698:4951424495142449534392016Desulfobacula toluolica Tol2, complete genomeexodeoxyribonuclease V subunit alpha7e-29129
NC_010803:1436397:1452865145286514546311767Chlorobium limicola DSM 245, complete genomeexodeoxyribonuclease V, alpha subunit4e-28126
NC_019940:2546500:2565827256582725677221896Thioflavicoccus mobilis 8321 chromosome, complete genomeexodeoxyribonuclease V subunit alpha4e-28126
NC_015740:3678342:3676216367621636783452130Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeexodeoxyribonuclease V subunit alpha9e-28125
NC_002663:564958:5936695936695956421974Pasteurella multocida subsp. multocida str. Pm70, complete genomeRecD2e-23110
NC_018691:3496420:3496420349642034983661947Alcanivorax dieselolei B5 chromosome, complete genomeExodeoxyribonuclease V alpha chain4e-1893.6
NC_012791:4794362:4818231481823148203572127Variovorax paradoxus S110 chromosome 1, complete genomeexodeoxyribonuclease V, alpha subunit6e-1892.8
NC_014500:2479814:2498288249828825003332046Dickeya dadantii 3937 chromosome, complete genomeexonuclease V (RecBCD complex), subunit alpha7e-1582.8
NC_013851:3478153:3493536349353634957582223Allochromatium vinosum DSM 180 chromosome, complete genomeexodeoxyribonuclease V, alpha subunit2e-1274.7
NC_010803:1436397:145115714511571451498342Chlorobium limicola DSM 245, complete genome3e-1067.4
NC_014924:3334386:3352228335222833541021875Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeexodeoxyribonuclease V, alpha subunit1e-0758.9