Pre_GI: BLASTP Hits

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Query: NC_017249:7917586:7963677 Bradyrhizobium japonicum USDA 6, complete genome

Start: 7963677, End: 7964897, Length: 1221

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010084:2484000:2490666249066624918501185Burkholderia multivorans ATCC 17616 chromosome 1, completeintegrase family protein1e-76286
NC_010804:996837:1032923103292310341071185Burkholderia multivorans ATCC 17616 chromosome 1, completetyrosine recombinase1e-76286
NC_015580:293803:3283633283633299041542Novosphingobium sp. PP1Y, complete genomephage integrase9e-60231
NC_011662:386162:4209644209644221991236Thauera sp. MZ1T, complete genomeintegrase family protein3e-45182
NC_002678:4859111:4882273488227348834961224Mesorhizobium loti MAFF303099, complete genomeintegrase/recombinase2e-43176
NC_008726:6335961:6335961633596163371481188Mycobacterium vanbaalenii PYR-1, complete genomephage integrase family protein7e-34145
NC_006513:286549:2865492865492878021254Azoarcus sp. EbN1, complete genomephage-related integrase4e-32139
NC_010338:2136193:2151285215128521524961212Caulobacter sp. K31, complete genomeintegrase family protein2e-29130
NC_010524:824145:8301058301058313581254Leptothrix cholodnii SP-6, complete genomeintegrase family protein4e-28125
NC_010524:824145:8398308398308411071278Leptothrix cholodnii SP-6, complete genomeintegrase family protein6e-26118
NC_006824:109735:125221125221126177957Azoarcus sp. EbN1 plasmid 2, complete sequenceputative integrase1e-25117
NC_010623:1961685:1978534197853419797931260Burkholderia phymatum STM815 chromosome 2, complete sequenceintegrase family protein8e-25115
NC_010571:5650806:5652242565224256535401299Opitutus terrae PB90-1, complete genomeintegrase family protein3e-23109
NC_016626:1699500:1702794170279417040561263Burkholderia sp. YI23 plasmid byi_1p, complete sequenceputative integrase/recombinase4e-22106
NC_016589:183432:1986361986361998981263Burkholderia sp. YI23 chromosome 1, complete sequenceputative integrase/recombinase4e-22106
NC_011761:2131911:2144157214415721454011245Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completesite-specific recombinase, phage integrase family1e-1894.4
NC_019904:5207309:5207309520730952085771269Echinicola vietnamensis DSM 17526 chromosome, complete genomesite-specific recombinase XerD4e-1789.7
NC_018866:1224748:1225943122594312271781236Dehalobacter sp. DCA chromosome, complete genomehypothetical protein7e-1685.5
NC_018867:1303287:1304482130448213057171236Dehalobacter sp. CF chromosome, complete genomeintegrase/recombinase, putative7e-1685.5
NC_011283:1811000:183605118360511836998948Klebsiella pneumoniae 342 chromosome, complete genomephage integrase family site-specific recombinase4e-1582.8
NC_007530:3616828:364611036461103647009900Bacillus anthracis str. 'Ames Ancestor', complete genometyrosine recombinase6e-1582.4
NC_005945:3636321:364667836466783647577900Bacillus anthracis str. Sterne, complete genometyrosine recombinase6e-1582.4
NC_003997:3617000:364598336459833646882900Bacillus anthracis str. Ames, complete genometyrosine recombinase6e-1582.4
NC_012659:3617000:364601036460103646909900Bacillus anthracis str. A0248, complete genomesite-specific tyrosine recombinase XerC6e-1582.4
NC_020302:85821:1265931265931278041212Corynebacterium halotolerans YIM 70093 = DSM 44683, completeintegrase/recombinase6e-1582.4
NC_020302:2219378:2242156224215622433671212Corynebacterium halotolerans YIM 70093 = DSM 44683, completeintegrase/recombinase6e-1582.4
NC_010170:1324758:1365410136541013665491140Bordetella petrii, complete genomeintegrase/recombinase5e-1582.4
NC_010170:1498253:1505848150584815069871140Bordetella petrii, complete genomeintegrase/recombinase5e-1582.4
NC_014335:3589726:359683735968373597736900Bacillus cereus biovar anthracis str. CI chromosome, completetyrosine recombinase5e-1582.4
NC_005957:3665657:366765636676563668555900Bacillus thuringiensis serovar konkukian str. 97-27, completetyrosine recombinase5e-1582.4
NC_017208:3816753:384609438460943846993900Bacillus thuringiensis serovar chinensis CT-43 chromosome, completesite-specific tyrosine recombinase XerC5e-1582.4
NC_010170:1103224:1109822110982211110301209Bordetella petrii, complete genomeintegrase/recombinase6e-1582
NC_011658:3603009:363402836340283634927900Bacillus cereus AH187 chromosome, complete genomesite-specific tyrosine recombinase XerC9e-1581.6
NC_011969:3575988:357798735779873578886900Bacillus cereus Q1 chromosome, complete genomesite-specific tyrosine recombinase xerc9e-1581.6
NC_014171:3726054:372995937299593730858900Bacillus thuringiensis BMB171 chromosome, complete genomesite-specific tyrosine recombinase1e-1481.3
NC_016631:3917253:3940194394019439414861293Granulicella mallensis MP5ACTX8 chromosome, complete genomeintegrase family protein1e-1481.3
NC_015730:1107840:1129515112951511307531239Roseobacter litoralis Och 149 chromosome, complete genomeputative phage integrase1e-1481.3
NC_015580:2444845:2444845244484524460741230Novosphingobium sp. PP1Y, complete genomephage integrase family protein1e-1481.3
NC_003909:3606177:362138136213813622280900Bacillus cereus ATCC 10987, complete genometyrosine recombinase1e-1480.9
NC_014098:2809689:2815877281587728171181242Bacillus tusciae DSM 2912 chromosome, complete genomeintegrase family protein2e-1480.5
NC_010337:591264:6078656078656090881224Heliobacterium modesticaldum Ice1, complete genomeintegrase/recombinase, putative3e-1273.6
NC_010337:591264:5981275981275993921266Heliobacterium modesticaldum Ice1, complete genomephage integrase4e-1272.8
NC_018870:757416:7642797642797655441266Thermacetogenium phaeum DSM 12270 chromosome, complete genomephage integrase4e-1272.8
NC_011206:2019577:203310120331012033442342Acidithiobacillus ferrooxidans ATCC 53993, complete genome1e-1171.6
NC_014376:3009403:3032351303235130335741224Clostridium saccharolyticum WM1 chromosome, complete genomeintegrase family protein1e-1171.2
NC_012581:559182:591678591678592577900Bacillus anthracis str. CDC 684 chromosome, complete genomesite-specific tyrosine recombinase XerC3e-1170.1
NC_010625:1602191:1602828160282816040451218Burkholderia phymatum STM815 plasmid pBPHY01, complete sequenceintegrase family protein4e-1169.7
NC_005126:4210500:4220710422071042218401131Photorhabdus luminescens subsp. laumondii TTO1, complete genometyrosine recombinase5e-1169.3
NC_005126:4210500:4229578422957842307081131Photorhabdus luminescens subsp. laumondii TTO1, complete genometyrosine recombinase5e-1169.3
NC_005126:1265071:1304929130492913060411113Photorhabdus luminescens subsp. laumondii TTO1, complete genometyrosine recombinase5e-1169.3
NC_005126:4333767:4342031434203143431431113Photorhabdus luminescens subsp. laumondii TTO1, complete genometyrosine recombinase5e-1169.3
NC_005126:4333767:4359526435952643606561131Photorhabdus luminescens subsp. laumondii TTO1, complete genometyrosine recombinase6e-1168.9
NC_005126:4333767:4349381434938143505111131Photorhabdus luminescens subsp. laumondii TTO1, complete genometyrosine recombinase6e-1168.9
NC_012962:3864000:3891084389108438922141131Photorhabdus asymbiotica, complete genomesimilar to phage integrase/recombinase8e-1168.6
NC_015589:3813415:382872038287203829688969Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeintegrase family protein1e-1067.8
NC_007907:3722500:3724204372420437252951092Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-1066.6
NC_016633:1798758:1801376180137618025721197Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomesite-specific recombinase XerD3e-1066.6
NC_005126:1315474:1322021132202113231511131Photorhabdus luminescens subsp. laumondii TTO1, complete genometyrosine recombinase6e-1065.9
NC_005126:1315474:1314357131435713154871131Photorhabdus luminescens subsp. laumondii TTO1, complete genometyrosine recombinase6e-1065.9
NC_005126:1265071:1314357131435713154871131Photorhabdus luminescens subsp. laumondii TTO1, complete genometyrosine recombinase6e-1065.9
NC_005126:589000:5990015990016001311131Photorhabdus luminescens subsp. laumondii TTO1, complete genometyrosine recombinase6e-1065.9
NC_005126:4333767:4368413436841343695431131Photorhabdus luminescens subsp. laumondii TTO1, complete genometyrosine recombinase5e-1065.9
NC_005126:1613818:1621192162119216223221131Photorhabdus luminescens subsp. laumondii TTO1, complete genometyrosine recombinase5e-1065.9
NC_014618:4657719:467550946755094676255747Enterobacter cloacae SCF1 chromosome, complete genome5e-1065.9
NC_016629:3308329:333954633395463340514969Desulfovibrio africanus str. Walvis Bay chromosome, completeTyrosine recombinase xerC4e-0962.8
NC_014228:2883500:2887800288780028888011002Xenorhabdus nematophila ATCC 19061, complete genomeInt (fragment)8e-0962
NC_014329:1407880:143528714352871436168882Corynebacterium pseudotuberculosis FRC41 chromosome, completetyrosine recombinase2e-0860.8
NC_016781:1408235:143522514352251436106882Corynebacterium pseudotuberculosis 3/99-5 chromosome, completetyrosine recombinase XerC2e-0860.8
NC_017031:1420738:143508914350891435970882Corynebacterium pseudotuberculosis P54B96 chromosome, completetyrosine recombinase XerC2e-0860.8
NC_017300:1426975:143264414326441433525882Corynebacterium pseudotuberculosis 1002 chromosome, completetyrosine recombinase XerC2e-0860.8
NC_017301:1425293:143503214350321435913882Corynebacterium pseudotuberculosis C231 chromosome, completetyrosine recombinase XerC2e-0860.8
NC_017303:1420758:143511014351101435991882Corynebacterium pseudotuberculosis I19 chromosome, complete genometyrosine recombinase XerC2e-0860.8
NC_009253:829913:844973844973845854882Desulfotomaculum reducens MI-1 chromosome, complete genomephage integrase family protein2e-0860.8
NC_006510:2910000:2939310293931029403231014Geobacillus kaustophilus HTA426, complete genomeintegrase/recombinase2e-0860.5
NC_012912:2174183:2197495219749521986041110Dickeya zeae Ech1591, complete genomeintegrase family protein2e-0860.5
NC_011206:2019577:203437320343732035371999Acidithiobacillus ferrooxidans ATCC 53993, complete genomeintegrase family protein3e-0860.1
NC_011761:2131911:214633221463322147330999Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completesite-specific recombinase, phage integrase family3e-0860.1
NC_004461:921364:929825929825930715891Staphylococcus epidermidis ATCC 12228, complete genomexerC protein3e-0860.1
NC_019908:121178:158426158426159352927Brachyspira pilosicoli P43/6/78 chromosome, complete genometyrosine recombinase XerD4e-0859.7
NC_018607:921923:958688958688959614927Brachyspira pilosicoli B2904 chromosome, complete genometyrosine recombinase4e-0859.7
NC_014738:1635000:163740416374041638279876Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,integrase family protein4e-0859.7
NC_014330:505412:505412505412506278867Brachyspira pilosicoli 95/1000 chromosome, complete genometyrosine recombinase XerD3e-0859.7
NC_016932:1414226:141989314198931420795903Corynebacterium pseudotuberculosis 316 chromosome, complete genometyrosine recombinase XerC3e-0859.7
NC_014314:576465:658834658834659820987Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeintegrase family protein5e-0859.3
NC_011295:33500:368853688537751867Coprothermobacter proteolyticus DSM 5265, complete genometyrosine recombinase XerD5e-0859.3
NC_013199:1407742:142829114282911429190900Lactobacillus rhamnosus Lc 705, complete genometyrosine recombinase XerC subunit6e-0858.9
NC_011297:1296968:129945012994501300340891Dictyoglomus thermophilum H-6-12, complete genometyrosine recombinase XerD8e-0858.5
NC_007168:1705763:171536717153671716260894Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein9e-0858.5
NC_019897:73957:849388493885921984Thermobacillus composti KWC4 chromosome, complete genomesite-specific recombinase XerD1e-0758.5
NC_015164:2859000:286196028619602862910951Bacteroides salanitronis DSM 18170 chromosome, complete genomeTyrosine recombinase xerC1e-0758.2
NC_019960:260997:272856272856273749894Prevotella dentalis DSM 3688 chromosome 1, complete sequencesite-specific recombinase XerD2e-0757.8
NC_014377:1060000:106688810668881067784897Thermosediminibacter oceani DSM 16646 chromosome, complete genometyrosine recombinase XerC2e-0757.4
NC_008536:435221:442656442656443567912Solibacter usitatus Ellin6076, complete genomephage integrase family protein3e-0757
NC_013939:1812259:181857918185791819487909Deferribacter desulfuricans SSM1, complete genometyrosine recombinase3e-0757
NC_016048:2055199:2072316207231620733231008Oscillibacter valericigenes Sjm18-20, complete genometyrosine recombinase XerC4e-0756.6
NC_013132:5942981:595668659566865957540855Chitinophaga pinensis DSM 2588, complete genomeintegrase family protein4e-0756.6
NC_014825:165701:1675111675111687431233Ruminococcus albus 7 plasmid pRUMAL02, complete sequenceintegrase family protein3e-0756.6
NC_014814:4326500:4331708433170843327901083Mycobacterium sp. Spyr1 chromosome, complete genomesite-specific recombinase XerD3e-0756.6
NC_009338:4913510:4943570494357049446521083Mycobacterium gilvum PYR-GCK chromosome, complete genomephage integrase family protein3e-0756.6
NC_003155:622993:642389642389642613225Streptomyces avermitilis MA-4680, complete genomeintegrase/recombinase3e-0756.6
NC_012214:1267589:1267589126758912686591071Erwinia pyrifoliae Ep1/96, complete genomeintegrase5e-0756.2
NC_012969:2476318:251726225172622518158897Methylovorus glucosetrophus SIP3-4 chromosome, complete genometyrosine recombinase XerD9e-0755.1
NC_015942:2316354:232253023225302322820291Acidithiobacillus ferrivorans SS3 chromosome, complete genome1e-0654.7
NC_014228:2883500:2894638289463828956661029Xenorhabdus nematophila ATCC 19061, complete genomeTyrosine recombinase xerC 21e-0654.7
NC_014733:2363838:238616023861602387056897Methylovorus sp. MP688 chromosome, complete genometyrosine recombinase xerd2e-0654.3
NC_013730:3695674:3716022371602237171941173Spirosoma linguale DSM 74, complete genomeintegrase family protein2e-0653.9
NC_016616:2699350:275244127524412753355915Dechlorosoma suillum PS chromosome, complete genometyrosine recombinase XerD6e-0652.4
NC_010510:388885:401104401104402021918Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeintegrase family protein7e-0652.4
NC_008726:1175999:1183143118314311842371095Mycobacterium vanbaalenii PYR-1, complete genomephage integrase family protein7e-0652