Pre_GI: BLASTP Hits

Some Help

Query: NC_017215:1361822:1380206 Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,

Start: 1380206, End: 1380790, Length: 585

Host Lineage: Bifidobacterium animalis; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium animalis and Bifidobacterium lactis were originally considered to be separate species. Recent studies evaluating the DNA relatedness and phenotypic similarities of these species has determined that they represent a single species.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017214:54558:729427294273526585Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeDipeptide-binding protein3e-110397
NC_017216:1356930:137520013752001375547348Bifidobacterium animalis subsp. lactis BLC1, complete genome3e-62237
NC_018750:1390029:1401849140184914034381590Streptomyces venezuelae ATCC 10712, complete genomeputative lipoprotein oligopeptide binding protein1e-33142
NC_013929:8106492:8111314811131481129181605Streptomyces scabiei 87.22 chromosome, complete genomeoligopeptide-binding lipoprotein6e-30130
NC_003888:1751179:1769946176994617715501605Streptomyces coelicolor A3(2), complete genomelipoprotein oligopeptide binding protein8e-30130
NC_009376:1335074:1351403135140313529831581Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomeextracellular solute-binding protein1e-26119
NC_016885:603269:6032696032696048791611Pyrobaculum oguniense TE7 chromosome, complete genomedipeptide ABC transporter periplasmic protein2e-26118
NC_018750:1390029:1400193140019314017731581Streptomyces venezuelae ATCC 10712, complete genomeOligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA9e-26116
NC_003155:7979050:7979050797905079806541605Streptomyces avermitilis MA-4680, complete genomelipoprotein oligopeptide binding protein3e-24111
NC_013929:8106492:8113009811300981145921584Streptomyces scabiei 87.22 chromosome, complete genomesubstrate-binding lipoprotein4e-24110
NC_003155:7979050:7980740798074079823231584Streptomyces avermitilis MA-4680, complete genomesolute binding transport lipoprotein6e-23107
NC_003888:6470909:6475426647542664769911566Streptomyces coelicolor A3(2), complete genomeoligopeptide binding protein5e-1890.9
NC_019908:2312194:2312194231219423137951602Brachyspira pilosicoli P43/6/78 chromosome, complete genomefamily 5 extracellular solute-binding protein3e-0858.5
NC_014330:888366:9065909065909081911602Brachyspira pilosicoli 95/1000 chromosome, complete genomefamily 5 extracellular solute-binding protein4e-0858.2
NC_018604:2350054:2368409236840923700101602Brachyspira pilosicoli WesB complete genomefamily 5 extracellular solute-binding protein4e-0857.8
NC_018607:2231975:2250321225032122519221602Brachyspira pilosicoli B2904 chromosome, complete genomefamily 5 extracellular solute-binding protein6e-0857.4
NC_018644:137755:1559891559891575571569Alpha proteobacterium HIMB59 chromosome, complete genomefamily 5 extracellular solute-binding protein8e-0857
NC_011661:1143787:1153051115305111546131563Dictyoglomus turgidum DSM 6724, complete genome4-phytase9e-0856.6
NC_009380:1885024:1905186190518619067181533Salinispora tropica CNB-440 chromosome, complete genomeextracellular solute-binding protein1e-0756.2
NC_000868:696296:6985996985997007162118Pyrococcus abyssi GE5, complete genomedipeptide ABC transporter, dipeptide-binding protein2e-0755.8
NC_016641:2950000:2970780297078029724351656Paenibacillus terrae HPL-003 chromosome, complete genomeheme-binding protein A2e-0755.5
NC_007005:4992730:5015990501599050175041515Pseudomonas syringae pv. syringae B728a, complete genomeextracellular solute-binding protein, family 53e-0755.1
NC_003364:756813:7702487702487724612214Pyrobaculum aerophilum str. IM2, complete genomedipeptide binding protein4e-0651.2