Pre_GI: BLASTP Hits

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Query: NC_017214:379728:390751 Bifidobacterium animalis subsp. lactis BB-12 chromosome, complete

Start: 390751, End: 391863, Length: 1113

Host Lineage: Bifidobacterium animalis; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium animalis and Bifidobacterium lactis were originally considered to be separate species. Recent studies evaluating the DNA relatedness and phenotypic similarities of these species has determined that they represent a single species.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017215:1687161:1698184169818416992961113Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,adenine-specific DNA-methyltransferase0769
NC_012814:1682500:1693597169359716946881092Bifidobacterium animalis subsp. lactis Bl-04, complete genomemodification methylase (adenine-specificmethyltransferase)0754
NC_012815:1682872:1693314169331416944051092Bifidobacterium animalis subsp. lactis DSM 10140, complete genomemodification methylase (adenine-specificmethyltransferase)0754
NC_011835:813345:8243668243668254571092Bifidobacterium animalis subsp. lactis AD011 chromosome, completemodification methylase EcoRI0754
NC_017216:1682219:1693242169324216943331092Bifidobacterium animalis subsp. lactis BLC1, complete genomeAdenine-specific methyltransferase EcoRI0754
NC_017217:1688441:1698883169888316999741092Bifidobacterium animalis subsp. lactis V9 chromosome, completemodification methylase (adenine-specificmethyltransferase)0754
NC_018720:1878201:1888682188868218899411260Bifidobacterium asteroides PRL2011 chromosome, complete genomeadenine-specific DNA modification methylase7e-80297
NC_010831:1224000:1246546124654612475471002Chlorobium phaeobacteroides BS1, complete genome2e-73276
NC_009615:3904962:393640239364023937367966Parabacteroides distasonis ATCC 8503 chromosome, complete genomeEcoRI methylase/methyltransferase2e-72273
NC_006958:1904582:192968319296831929856174Corynebacterium glutamicum ATCC 13032, complete genomeputative methyltransferase6e-0858.9
NC_003450:1903110:192821119282111928384174Corynebacterium glutamicum ATCC 13032, complete genomehypothetical protein6e-0858.9