Pre_GI: BLASTP Hits

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Query: NC_017168:3192817:3213254 Yersinia pestis A1122 chromosome, complete genome

Start: 3213254, End: 3214372, Length: 1119

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016830:530397:5309575309575322341278Pseudomonas fluorescens F113 chromosome, complete genomemajor facilitator superfamily permease5e-80298
NC_009434:608765:6330036330036344601458Pseudomonas stutzeri A1501, complete genomemajor facilitator family transporter4e-76285
NC_020541:2487427:2510965251096525122121248Rhodanobacter sp. 2APBS1, complete genomearabinose efflux permease family protein6e-52204
NC_011761:2067695:2078182207818220794981317Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completemajor facilitator family transporter3e-51202
NC_021171:1661923:1679048167904816802591212Bacillus sp. 1NLA3E, complete genomemajor facilitator superfamily protein5e-44178
NC_014639:2169277:2189189218918921903851197Bacillus atrophaeus 1942 chromosome, complete genomeYybF1 protein3e-41169
CP002207:2169277:2189189218918921903851197Bacillus atrophaeus 1942, complete genomeYybF13e-41169
NC_019842:3921424:3922147392214739233491203Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein1e-40167
UCMB5137:2128500:2152994215299421541901197Bacillus atrophaeus UCMB-5137YybF11e-40167
NC_009725:3878862:3878862387886238800641203Bacillus amyloliquefaciens FZB42, complete genomeYybF1e-39164
NC_012914:5194791:5209513520951352107211209Paenibacillus sp. JDR-2, complete genomemajor facilitator superfamily MFS_11e-37157
NC_014976:2175667:2175667217566721768811215Bacillus subtilis BSn5 chromosome, complete genomeputative permease4e-36152
NC_019896:17873:3686536865380791215Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completetransport protein YybF7e-36151
NC_000964:4164683:4178187417818741794011215Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein2e-35150
NC_014215:1841064:1841064184106418423021239Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Major facilitator family protein transporter1e-31137
NC_013757:3100515:3105366310536631065921227Geodermatophilus obscurus DSM 43160, complete genomemajor facilitator superfamily MFS_15e-28125
NC_018681:2176000:2197763219776321990041242Nocardia brasiliensis ATCC 700358 chromosome, complete genomemajor facilitator superfamily protein9e-27121
NC_007645:6858465:6861012686101268622171206Hahella chejuensis KCTC 2396, complete genomePermease of the major facilitator superfamily1e-25117
NC_011083:403022:4185364185364197681233Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative permease3e-22106
NC_016856:365665:3720943720943733261233Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative permease3e-22106
NC_016860:397138:4128004128004140321233Salmonella enterica subsp. enterica serovar Typhimurium strputative permease3e-22106
NC_017046:366905:3708843708843721161233Salmonella enterica subsp. enterica serovar Typhimurium str. 798permease/MSF transporter3e-22106
NC_011294:346915:3507073507073519451239Salmonella enterica subsp. enterica serovar Enteritidis strpermease/MSF transporter3e-22106
NC_016810:366908:3708363708363721191284Salmonella enterica subsp. enterica serovar Typhimurium strputative permease/MSF transporter3e-22106
NC_016863:367404:3713773713773726151239Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative permease3e-22106
NC_011205:371001:3747993747993760311233Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853permease2e-22106
NC_003197:367430:3713043713043726411338Salmonella typhimurium LT2, complete genomeputative permease2e-22106
NC_016857:366908:3707823707823721191338Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative permease2e-22106
NC_006905:401154:4158424158424171791338Salmonella enterica subsp. enterica serovar Choleraesuis strputative permease2e-22106
NC_014210:2638773:2642788264278826440741287Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,major facilitator superfamily MFS_15e-1892.4
NC_014541:643604:6509636509636521531191Ferrimonas balearica DSM 9799 chromosome, complete genomemajor facilitator superfamily MFS_14e-1789.4
NC_015064:1984662:2008989200898920102211233Acidobacterium sp. MP5ACTX9 chromosome, complete genomemajor facilitator superfamily MFS_11e-1067.8
NC_012483:3529895:3545408354540835466791272Acidobacterium capsulatum ATCC 51196, complete genometransporter, major facilitator family2e-0860.5