Pre_GI: BLASTP Hits

Some Help

Query: NC_016944:1978058:1997057 Vibrio cholerae IEC224 chromosome I, complete sequence

Start: 1997057, End: 1997266, Length: 210

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016445:1363831:142214014221401422433294Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein3e-32137
NC_012668:1688500:169647516964751696768294Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein3e-32137
NC_017270:1755552:178792217879221788140219Vibrio cholerae LMA3984-4 chromosome chromosome I, completehypothetical protein4e-32136
NC_009457:1444449:150384215038421504060219Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein4e-32136
NC_008577:2115440:212463021246302125307678Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein1e-0961.6
NC_008322:2077628:208846620884662089143678Shewanella sp. MR-7, complete genomehypothetical protein6e-0959.7
NC_005139:796546:806984806984807628645Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein2e-0754.3
NC_009092:1441813:145080814508081451473666Shewanella loihica PV-4, complete genometransposase2e-0754.3
NC_015663:1869000:187942718794271879816390Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein3e-0753.9
NC_017328:1075535:109037810903781090674297Shigella flexneri 2002017 chromosome, complete genomehypothetical protein3e-0753.9
NC_015379:908904:935764935764936426663Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Hypothetical protein; putative prophage8e-0752.8
NC_013456:212150:228379228379229041663Vibrio sp. Ex25 chromosome 1, complete genomehypothetical protein3e-0650.4
NC_010473:247429:267096267096267722627Escherichia coli str. K-12 substr. DH10B, complete genomeCP4-6 prophage; conserved protein7e-0649.3
NC_000913:272071:291546291546292172627Escherichia coli K12, complete genomeCP4-6 prophage; conserved protein7e-0649.3
AC_000091:273325:291546291546292172627Escherichia coli W3110 DNA, complete genomehypothetical protein7e-0649.3
NC_008321:1993541:200569020056902006352663Shewanella sp. MR-4, complete genomehypothetical protein9e-0648.9