Pre_GI: BLASTP Hits

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Query: NC_016944:1937645:1949933 Vibrio cholerae IEC224 chromosome I, complete sequence

Start: 1949933, End: 1952053, Length: 2121

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012668:1688500:1741763174176317438832121Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein01379
NC_012582:1976962:1988147198814719902672121Vibrio cholerae O395 chromosome chromosome I, complete sequenceRestin-related protein01379
NC_012578:1838470:1850758185075818528782121Vibrio cholerae M66-2 chromosome I, complete sequenceRestin-like protein01379
NC_009457:1444449:1456728145672814588482121Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein01379
NC_002505:1892430:1903625190362519057452121Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein01379
NC_016445:1363831:1375025137502513771452121Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein01378
NC_008577:4533574:4544823454482345469132091Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein3e-179629
NC_007645:3756654:3762737376273737647372001Hahella chejuensis KCTC 2396, complete genomeMethyl-accepting chemotaxis protein1e-95351
NC_009656:6224221:6238298623829862404242127Pseudomonas aeruginosa PA7 chromosome, complete genomemethyl-accepting chemotaxis protein9e-74278
NC_009434:1580205:1580205158020515825562352Pseudomonas stutzeri A1501, complete genomehypothetical protein2e-59231
NC_015588:939037:9414089414089430331626Isoptericola variabilis 225 chromosome, complete genomehypothetical protein2e-44181
NC_019940:1963000:1965119196511919668791761Thioflavicoccus mobilis 8321 chromosome, complete genomehypothetical protein4e-1790.5
NC_011000:1397611:1414675141467514166782004Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein8e-1789.4
NC_017986:1885613:1921223192122319234152193Pseudomonas putida ND6 chromosome, complete genomehypothetical protein2e-1585.1
NC_009512:5166459:5175259517525951774512193Pseudomonas putida F1, complete genomehypothetical protein2e-1585.1
NC_008757:151862:1518621518621543122451Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completehypothetical protein1e-1275.9
NC_017075:1869326:1873936187393618759392004Rubrivivax gelatinosus IL144, complete genomehypothetical protein2e-1275.1
NC_003902:1680414:1688713168871316906021890Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein3e-1170.9
NC_008639:2545107:255913625591362559921786Chlorobium phaeobacteroides DSM 266, complete genomehypothetical protein9e-1066.2
NC_012918:1174412:1186285118628511882852001Geobacter sp. M21 chromosome, complete genomehypothetical protein1e-0758.5
NC_009778:567000:5794935794935816822190Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein4e-0653.9
NC_013851:3321853:3328051332805133291631113Allochromatium vinosum DSM 180 chromosome, complete genomehypothetical protein5e-0653.5
NC_012489:209016:2205642205642225732010Gemmatimonas aurantiaca T-27, complete genomehypothetical membrane protein7e-0653.1