Pre_GI: BLASTP Hits

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Query: NC_016944:1504888:1514449 Vibrio cholerae IEC224 chromosome I, complete sequence

Start: 1514449, End: 1515186, Length: 738

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: It was isolated in November of 1994 at the city of Belém/Pa from a stool sample. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016445:984856:994416994416995153738Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein4e-136483
NC_002505:1507860:151742115174211518158738Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein4e-136483
NC_009457:1068000:107584210758421076579738Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein2e-134478
NC_012668:2115228:212591321259132126545633Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein2e-121434
NC_012578:1465302:147486314748631475600738Vibrio cholerae M66-2 chromosome I, complete sequencehypothetical protein5e-120430
NC_016602:2037162:204853420485342049292759Vibrio furnissii NCTC 11218 chromosome 1, complete sequencehypothetical protein4e-71267