Pre_GI: BLASTP Hits

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Query: NC_016860:4055117:4062380 Salmonella enterica subsp. enterica serovar Typhimurium str

Start: 4062380, End: 4062973, Length: 594

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. This strain was isolated in Japan in 2000. It is of definitive phage type 12 (DT12) and resistant against mulitple antimicrobials including fluoroquinolones.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020418:448687:460184460184460777594Morganella morganii subsp. morganii KT, complete genomehypothetical protein2e-111401
NC_017328:1075535:110535211053521105945594Shigella flexneri 2002017 chromosome, complete genomeTransposon Tn10 tetC protein2e-111401
NC_011748:4950723:497537349753734976041669Escherichia coli 55989, complete genomeputative Transcriptional regulator2e-111400
NC_011749:34056:427694276943437669Escherichia coli UMN026 plasmid p1ESCUM, complete sequencetranscriptionnal regulator involved in tetracycline resistance2e-111400
NC_010939:405477:415026415026415694669Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeTransposon Tn10 tetC protein (ORFL)2e-111400
CU928145:4950723:497537349753734976041669Escherichia coli 55989 chromosome, complete genomeputative Transcriptional regulator2e-111400
NC_003384:157158:177511177511177822312Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid1e-53209
NC_013365:92973:980169801698270255Escherichia coli O111:H- str. 11128 plasmid pO111_1, complete4e-42171
NC_008595:1911491:192312819231281923763636Mycobacterium avium 104, complete genometranscriptional regulator, TetR family protein6e-1373.9
NC_008750:2332000:235360923536092354196588Shewanella sp. W3-18-1, complete genometranscriptional regulator, TetR family1e-0963.2
NC_009436:3807420:382089238208923821488597Enterobacter sp. 638, complete genomeTetR family transcriptional regulator2e-0962
NC_009668:1591290:159361715936171594213597Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceTetR family transcriptional regulator3e-0962
NC_020181:1653261:166443116644311665033603Enterobacter aerogenes EA1509E, complete genomeTranscriptional regulator, TetR family7e-0960.5
NC_009511:1781914:1791327179132717926011275Sphingomonas wittichii RW1 chromosome, complete genomeTetR family transcriptional regulator1e-0860.1
NC_009512:2108686:213674621367462137351606Pseudomonas putida F1, complete genometranscriptional regulator, TetR family1e-0859.7
NC_017986:4790482:483635748363574836962606Pseudomonas putida ND6 chromosome, complete genomeTetR family transcriptional regulator1e-0859.7
NC_015663:3742738:375320437532043753806603Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein5e-0857.8
NC_017161:1117741:112188511218851122460576Hydrogenobacter thermophilus TK-6 chromosome, complete genomeTetR family transcriptional regulator4e-0754.7
NC_013799:1117750:112189411218941122469576Hydrogenobacter thermophilus TK-6, complete genometranscriptional regulator, TetR family4e-0754.7
NC_016935:4367000:440472344047234405346624Paenibacillus mucilaginosus 3016 chromosome, complete genomeputative transcriptional regulator5e-0754.3
NC_013595:8553904:856484385648438565427585Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, TetR family1e-0653.1
NC_016948:1796989:181936118193611819903543Mycobacterium intracellulare MOTT-64 chromosome, complete genomeTetR family transcriptional regulator1e-0653.1
NC_003030:3871658:389192338919233892513591Clostridium acetobutylicum ATCC 824, complete genomeTranscriptional regulator, AcrR family1e-0652.8
NC_015690:2039215:206876320687632069362600Paenibacillus mucilaginosus KNP414 chromosome, complete genomeTetR family transcriptional regulator4e-0651.2
NC_016935:2567039:261829326182932618892600Paenibacillus mucilaginosus 3016 chromosome, complete genomeTetR family transcriptional regulator4e-0651.2
NC_009663:946285:955392955392955952561Sulfurovum sp. NBC37-1, complete genomeTetR family transcriptional regulator6e-0650.8
NC_016629:2449731:246899324689932469565573Desulfovibrio africanus str. Walvis Bay chromosome, completetranscriptional regulator, TetR family9e-0650.1
NC_011837:238160:243295243295243891597Clostridium kluyveri NBRC 12016, complete genomehypothetical protein1e-0550.1
NC_009706:238160:243295243295243891597Clostridium kluyveri DSM 555 chromosome, complete genometranscriptional regulator1e-0550.1
NC_015500:1204501:121396412139641214560597Treponema brennaborense DSM 12168 chromosome, complete genometranscriptional regulator, TetR family1e-0550.1