Pre_GI: BLASTP Hits

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Query: NC_016830:6499234:6511046 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 6511046, End: 6512476, Length: 1431

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009434:1068281:108088810808881081748861Pseudomonas stutzeri A1501, complete genomeoxidoreductase, FAD-binding1e-0861.6
NC_009439:1075170:1088508108850810895931086Pseudomonas mendocina ymp, complete genomeglycine oxidase ThiO2e-0860.5
NC_008463:5364428:5368835536883553699291095Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative Glycine/D-amino acid oxidases6e-0859.3
NC_015556:4118304:4123843412384341249161074Pseudomonas fulva 12-X chromosome, complete genomeglycine oxidase ThiO2e-0757.8
NC_015410:1144272:1156632115663211576961065Pseudomonas mendocina NK-01 chromosome, complete genomeglycine oxidase ThiO2e-0757.8
NC_018080:5192264:5197779519777951988551077Pseudomonas aeruginosa DK2 chromosome, complete genomeD-amino acid oxidase2e-0757.4
NC_014831:2201246:2223388222338822245871200Thermaerobacter marianensis DSM 12885 chromosome, complete genomeglycine oxidase ThiO4e-0756.6
NC_015942:1711026:1727085172708517281761092Acidithiobacillus ferrivorans SS3 chromosome, complete genomeFAD dependent oxidoreductase1e-0654.7
NC_015740:926920:9394409394409405371098Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeFAD-binding oxidoreductase3e-0653.9