Pre_GI: BLASTP Hits

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Query: NC_016830:530397:530957 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 530957, End: 532234, Length: 1278

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009434:608765:6330036330036344601458Pseudomonas stutzeri A1501, complete genomemajor facilitator family transporter2e-112406
NC_011761:2067695:2078182207818220794981317Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completemajor facilitator family transporter1e-76286
NC_020541:2487427:2510965251096525122121248Rhodanobacter sp. 2APBS1, complete genomearabinose efflux permease family protein9e-75281
NC_017168:3192817:3213254321325432143721119Yersinia pestis A1122 chromosome, complete genomehypothetical protein2e-73276
NC_019842:3921424:3922147392214739233491203Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein9e-68258
NC_009725:3878862:3878862387886238800641203Bacillus amyloliquefaciens FZB42, complete genomeYybF8e-67254
NC_019896:17873:3686536865380791215Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completetransport protein YybF3e-65249
NC_014976:2175667:2175667217566721768811215Bacillus subtilis BSn5 chromosome, complete genomeputative permease2e-65249
NC_000964:4164683:4178187417818741794011215Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein1e-64247
NC_014639:2169277:2189189218918921903851197Bacillus atrophaeus 1942 chromosome, complete genomeYybF1 protein2e-62240
CP002207:2169277:2189189218918921903851197Bacillus atrophaeus 1942, complete genomeYybF12e-62240
NC_012914:5194791:5209513520951352107211209Paenibacillus sp. JDR-2, complete genomemajor facilitator superfamily MFS_16e-62238
UCMB5137:2128500:2152994215299421541901197Bacillus atrophaeus UCMB-5137YybF16e-62238
NC_021171:1661923:1679048167904816802591212Bacillus sp. 1NLA3E, complete genomemajor facilitator superfamily protein7e-59228
NC_013757:3100515:3105366310536631065921227Geodermatophilus obscurus DSM 43160, complete genomemajor facilitator superfamily MFS_11e-39164
NC_018681:2176000:2197763219776321990041242Nocardia brasiliensis ATCC 700358 chromosome, complete genomemajor facilitator superfamily protein6e-39162
NC_014215:1841064:1841064184106418423021239Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Major facilitator family protein transporter1e-38161
NC_014210:2638773:2642788264278826440741287Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,major facilitator superfamily MFS_12e-35150
NC_016863:367404:3713773713773726151239Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative permease2e-35150
NC_011294:346915:3507073507073519451239Salmonella enterica subsp. enterica serovar Enteritidis strpermease/MSF transporter2e-35150
NC_016857:366908:3707823707823721191338Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative permease2e-35150
NC_003197:367430:3713043713043726411338Salmonella typhimurium LT2, complete genomeputative permease2e-35150
NC_011083:403022:4185364185364197681233Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative permease2e-35150
NC_016856:365665:3720943720943733261233Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative permease2e-35150
NC_016860:397138:4128004128004140321233Salmonella enterica subsp. enterica serovar Typhimurium strputative permease2e-35150
NC_017046:366905:3708843708843721161233Salmonella enterica subsp. enterica serovar Typhimurium str. 798permease/MSF transporter2e-35150
NC_016810:366908:3708363708363721191284Salmonella enterica subsp. enterica serovar Typhimurium strputative permease/MSF transporter2e-35150
NC_006905:401154:4158424158424171791338Salmonella enterica subsp. enterica serovar Choleraesuis strputative permease2e-35150
NC_011205:371001:3747993747993760311233Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853permease1e-35150
NC_014541:643604:6509636509636521531191Ferrimonas balearica DSM 9799 chromosome, complete genomemajor facilitator superfamily MFS_13e-33142
NC_007645:6858465:6861012686101268622171206Hahella chejuensis KCTC 2396, complete genomePermease of the major facilitator superfamily1e-32140
NC_012483:3529895:3545408354540835466791272Acidobacterium capsulatum ATCC 51196, complete genometransporter, major facilitator family4e-23109
NC_015064:1984662:2008989200898920102211233Acidobacterium sp. MP5ACTX9 chromosome, complete genomemajor facilitator superfamily MFS_13e-1686.7
NC_004129:2328491:2355436235543623566621227Pseudomonas fluorescens Pf-5, complete genomemajor facilitator superfamily protein superfamily4e-1066.6
NC_014118:987889:1040404104040410416301227Burkholderia sp. CCGE1002 chromosome chromosome 2, completemajor facilitator superfamily MFS_11e-0861.6
NC_013947:3534209:3556133355613335573621230Stackebrandtia nassauensis DSM 44728 chromosome, complete genomemajor facilitator superfamily MFS_19e-0755.1