Pre_GI: BLASTP Hits

Some Help

Query: NC_016830:4999946:5018559 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 5018559, End: 5021138, Length: 2580

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015733:1976752:1976752197675219802403489Pseudomonas putida S16 chromosome, complete genomeputative pyocin R2_PP, tail length determination protein0811
NC_017986:4124335:4124335412433541277243390Pseudomonas putida ND6 chromosome, complete genomeputative pyocin R2 PP, tail length determination protein0808
NC_004129:2234851:2234851223485122374182568Pseudomonas fluorescens Pf-5, complete genometail tape meausure protein0770
NC_004578:3817330:3833793383379338365432751Pseudomonas syringae pv. tomato str. DC3000, complete genometail tape meausure protein0747
NC_008390:2018201:2038128203812820405722445Burkholderia cepacia AMMD chromosome 1, complete sequencepyocin R2_PP, tail length determination protein, putative3e-137489
NC_012724:3070386:3086933308693330891072175Burkholderia glumae BGR1 chromosome 1, complete genomePyocin R2_PP, tail length determination protein, putative3e-135483
NC_015381:3457784:3475494347549434774461953Burkholderia gladioli BSR3 chromosome 1, complete sequencePyocin R2_PP, tail length determination protein7e-134478
NC_017033:1089579:1090522109052210928402319Frateuria aurantia DSM 6220 chromosome, complete genomePhage-related minor tail protein6e-125449
NC_014307:1765230:1774499177449917770032505Ralstonia solanacearum CFBP2957 chromosome, complete genomephage tail tape measure protein2e-35151
NC_011002:564654:5820795820795846192541Burkholderia cenocepacia J2315 chromosome 3, complete sequenceputative phage tail protein8e-33142
NC_005085:1564087:1571130157113015738562727Chromobacterium violaceum ATCC 12472, complete genomeprobable bacteriophage protein2e-28128
NC_011750:2009889:2027129202712920300802952Escherichia coli IAI39 chromosome, complete genomeputative phage minor tail protein2e-22108
NC_007604:743738:7437387437387465902853Synechococcus elongatus PCC 7942, complete genomePhage tail tape measure protein TP901, core region1e-1895.9
NC_006576:856014:8742818742818771332853Synechococcus elongatus PCC 6301, complete genomeputative bacteriophage protein2e-1895.1
NC_015381:2109500:211234121123412112628288Burkholderia gladioli BSR3 chromosome 1, complete sequencePyocin R2_PP, tail length determination protein9e-1479.7
NC_002927:3827211:3842005384200538442092205Bordetella bronchiseptica RB50, complete genomehypothetical protein4e-1274.3