Pre_GI: BLASTP Hits

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Query: NC_016830:4010637:4025021 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 4025021, End: 4026706, Length: 1686

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:2575000:2583779258377925859682190Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Regulatory protein01166
NC_007645:3478630:3480576348057634827142139Hahella chejuensis KCTC 2396, complete genomeRegulator of nitric oxide reductase transcription0807
NC_008340:1241300:1250565125056512527032139Alkalilimnicola ehrlichei MLHE-1, complete genomeFMN-binding domain protein1e-175616
NC_010511:3160123:3177809317780931800582250Methylobacterium sp. 4-46 chromosome, complete genomeFMN-binding domain-containing protein7e-150531
NC_016002:3813039:3819579381957938215581980Pseudogulbenkiania sp. NH8B, complete genometranscriptional regulator NosR1e-100367
NC_017511:1257663:1283098128309812842851188Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeRegulatory protein NosR8e-93341
NC_012792:962292:9816309816309837382109Variovorax paradoxus S110 chromosome 2, complete genomenitrous oxide expression regulator, NosR1e-89330
NC_017511:1257663:1284289128428912854281140Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeFMN-binding protein5e-33142
NC_011601:1039500:1039534103953410406071074Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome(4Fe-4S)-binding protein1e-1585.5
NC_009635:905768:912381912381913103723Methanococcus aeolicus Nankai-3 chromosome, complete genome4Fe-4S ferredoxin3e-1377.4
NC_020291:902635:9177929177929193661575Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome4Fe-4S binding domain/FMN-binding domain-containing protein3e-1377
NC_014122:726070:748696748696749379684Methanocaldococcus infernus ME chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein8e-1272.4
NC_016751:1299738:1321580132158013231631584Marinitoga piezophila KA3 chromosome, complete genomehypothetical protein8e-1272.4
NC_013716:1138441:1167336116733611684151080Citrobacter rodentium ICC168, complete genomeputative electron transport protein2e-1171.6
NC_010814:190673:2019772019772029811005Geobacter lovleyi SZ, complete genome4Fe-4S ferredoxin, iron-sulfur binding domain protein5e-1169.7
NC_010001:232976:245608245608246474867Clostridium phytofermentans ISDg, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein2e-1068.2
NC_020291:902635:915343915343916002660Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome4Fe-4S binding domain-containing protein4e-1067
NC_013890:1142500:1165306116530611664751170Dehalococcoides sp. GT chromosome, complete genomeFMN-binding domain protein1e-0965.1
NC_020387:1257163:1286934128693412881031170Dehalococcoides mccartyi BTF08, complete genomeCprC-like protein1e-0965.1
NC_000909:657904:675147675147675887741Methanocaldococcus jannaschii DSM 2661, complete genomehypothetical protein2e-0964.7
NC_014222:186876:187719187719188441723Methanococcus voltae A3 chromosome, complete genome4Fe-4S ferredoxin iron-sulfur binding domain protein4e-0963.5
NC_015737:449914:473574473574474548975Clostridium sp. SY8519, complete genomehypothetical protein4e-0963.5
NC_002936:285527:2968752968752985931719Dehalococcoides ethenogenes 195, complete genometranscriptional regulator, putative9e-0858.9
NC_012108:1067876:109284410928441093680837Desulfobacterium autotrophicum HRM2, complete genomeNapH4e-0757
NC_010814:3048441:3075996307599630771441149Geobacter lovleyi SZ, complete genomeFMN-binding domain protein1e-0655.5
NC_014973:54449:746067460675394789Geobacter sp. M18 chromosome, complete genomeferredoxin-type protein, NapH/MauN family2e-0655.1
NC_014828:2038692:208033120803312081044714Ethanoligenens harbinense YUAN-3 chromosome, complete genome4Fe-4S ferredoxin, iron-sulfur binding protein2e-0654.3