Pre_GI: BLASTP Hits

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Query: NC_016830:3869572:3923203 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 3923203, End: 3925308, Length: 2106

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008782:2326439:2342331234233123444872157Acidovorax sp. JS42, complete genomehypothetical protein01027
NC_011662:1041725:1058794105879410609502157Thauera sp. MZ1T, complete genomehypothetical protein01021
NC_011662:1058794:1058794105879410609502157Thauera sp. MZ1T, complete genomehypothetical protein01021
NC_015422:1876102:1877261187726118794172157Alicycliphilus denitrificans K601 chromosome, complete genomeconjugative coupling factor TraD01019
NC_008344:49039:9427694276964502175Nitrosomonas eutropha C91, complete genomehypothetical protein01018
NC_011901:2983555:2984093298409329862582166Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein01018
NC_008825:2525380:2544905254490525470612157Methylibium petroleiphilum PM1, complete genomehypothetical protein01017
NC_006513:1379735:1456939145693914590952157Azoarcus sp. EbN1, complete genomehypothetical protein01014
NC_009138:1974935:2013321201332120155072187Herminiimonas arsenicoxydans, complete genomehypothetical protein01010
NC_008752:558828:5705895705895727812193Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein01009
NC_010002:4544818:4560799456079945629822184Delftia acidovorans SPH-1, complete genomehypothetical protein01006
NC_010170:1498253:1533811153381115359972187Bordetella petrii, complete genomeputative plasmid-transfer-protein01001
NC_012691:2614603:2657994265799426601832190Tolumonas auensis DSM 9187, complete genomehypothetical protein0997
NC_012912:483390:5132735132735154322160Dickeya zeae Ech1591, complete genomehypothetical protein0993
NC_015379:2417312:2448780244878024509092130Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein0974
NC_007005:1636875:1640953164095316431122160Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein0940
NC_004129:5373886:5425475542547554276912217Pseudomonas fluorescens Pf-5, complete genomehypothetical protein0908
NC_009656:4527457:4629139462913946313702232Pseudomonas aeruginosa PA7 chromosome, complete genomeTraG/TraD family protein0907
NC_018080:5091772:5154147515414751563782232Pseudomonas aeruginosa DK2 chromosome, complete genomeTraG/TraD family protein0903
NC_003919:2639080:2640736264073626424331698Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein0871
NC_010170:4533416:4533416453341645351431728Bordetella petrii, complete genomehypothetical protein0863
NC_014532:3555550:3577209357720935794132205Halomonas elongata DSM 2581, complete genomehypothetical protein0833
NC_004547:611178:6262086262086283042097Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative plasmid transfer protein0833
NC_009708:4182460:4195489419548941976092121Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein0832
NC_016845:4539381:4539381453938145414802100Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,TraG-family protein0832
NC_015566:316340:3320983320983342122115Serratia sp. AS12 chromosome, complete genomeconjugative coupling factor TraD, SXT/TOL subfamily0828
NC_015567:313035:3322633322633343772115Serratia sp. AS9 chromosome, complete genomeconjugative coupling factor TraD, SXT/TOL subfamily0828
NC_014029:331919:3628313628313649452115Yersinia pestis Z176003 chromosome, complete genomehypothetical protein0826
NC_009832:358291:3776443776443797582115Serratia proteamaculans 568, complete genomeputative plasmid transfer protein0819
NC_013892:3278647:3300074330007433021372064Xenorhabdus bovienii SS-2004 chromosome, complete genomeplasmid transfer protein0814
NC_013892:1483000:1495028149502814970912064Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein0805
NC_005126:1223042:1245675124567512476331959Photorhabdus luminescens subsp. laumondii TTO1, complete genome0801
NC_014228:3391500:3422946342294634251202175Xenorhabdus nematophila ATCC 19061, complete genomeputative plasmid transfer protein0793
NC_012731:600518:6155556155556175732019Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein0788
NC_020181:3328844:3346044334604433480772034Enterobacter aerogenes EA1509E, complete genomeType IV secretory pathway, VirD4 components0767
NC_015572:2186394:2209094220909422111482055Methylomonas methanica MC09 chromosome, complete genomeconjugative coupling factor TraD, SXT/TOL subfamily0749
NC_007484:667879:6784426784426805682127Nitrosococcus oceani ATCC 19707, complete genomehypothetical protein0747
NC_016616:2699350:2721455272145527235482094Dechlorosoma suillum PS chromosome, complete genomeconjugative coupling factor TraD, TOL family2e-172606
NC_011035:829945:8903968903968924382043Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeprotein TraD4e-166585
NC_004578:934867:952643952643953524882Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein5e-98359
NC_011992:1234610:123536812353681236240873Acidovorax ebreus TPSY, complete genomehypothetical protein8e-77288
NC_014228:3391500:3399836339983634021752340Xenorhabdus nematophila ATCC 19061, complete genome3e-73276
NC_010554:2646806:2700609270060927024291821Proteus mirabilis HI4320, complete genomeplasmid conjugative transfer protein6e-71269
NC_015724:411860:4131604131604149861827Cupriavidus necator N-1 plasmid BB2p, complete sequencechannel-forming protein TraG3e-64247
NC_010682:1593108:1609469160946916113251857Ralstonia pickettii 12J chromosome 1, complete sequencehypothetical protein9e-64245
NC_010087:319063:3223693223693242371869Burkholderia multivorans ATCC 17616 chromosome 3, completeconserved hypothetical protein7e-61235
NC_015850:2048251:2065477206547720672311755Acidithiobacillus caldus SM-1 chromosome, complete genometype IV conjugative transfer system protein TraD5e-60233
NC_005241:380415:3804153804153822801866Ralstonia eutropha H16 megaplasmid pHG1, complete sequencechannel-forming protein6e-57222
NC_007298:2769525:2797240279724027991471908Dechloromonas aromatica RCB, complete genomehypothetical protein1e-55218
NC_015422:2858228:2924276292427629261831908Alicycliphilus denitrificans K601 chromosome, complete genomeconjugative coupling factor TraD1e-53211
NC_007950:206474:2222002222002241071908Polaromonas sp. JS666 plasmid 2, complete sequencehypothetical protein4e-41170
NC_010170:4533416:453492945349294535600672Bordetella petrii, complete genomehypothetical protein2e-34147
NC_003919:2639080:264026226402622640660399Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein2e-23111
NC_002939:2315402:2340674234067423420681395Geobacter sulfurreducens PCA, complete genomeTraG family protein2e-1894.7
NC_002939:2337402:2340674234067423420681395Geobacter sulfurreducens PCA, complete genomeTraG family protein2e-1894.7
NC_014836:1551965:1574585157458515759671383Desulfurispirillum indicum S5 chromosome, complete genomeDNA transfer in the process of conjugation and F pilus assembly protein4e-1687
NC_014228:2270000:231236723123672313140774Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein; putative membrane protein5e-1377
NC_014972:3604534:360670036067003607692993Desulfobulbus propionicus DSM 2032 chromosome, complete genome3e-1067.4