Pre_GI: BLASTP Hits

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Query: NC_016830:1901488:1925332 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 1925332, End: 1925493, Length: 162

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010322:1520973:153960915396091540574966Pseudomonas putida GB-1 chromosome, complete genomeNAD-dependent epimerase/dehydratase3e-1373.6
NC_008027:1559083:158039715803971581362966Pseudomonas entomophila L48, complete genomeUDP-glucose 4-epimerase1e-1271.6
NC_009656:1994392:202461820246182025574957Pseudomonas aeruginosa PA7 chromosome, complete genomeUDP-glucose 4-epimerase3e-1270.1
NC_007948:4176579:417950841795084180470963Polaromonas sp. JS666, complete genomeNAD-dependent epimerase/dehydratase6e-1269.3
NC_007492:4563981:457943345794334580395963Pseudomonas fluorescens PfO-1, complete genomeNAD-dependent epimerase/dehydratase4e-1166.6
NC_004129:4993974:500475350047535005715963Pseudomonas fluorescens Pf-5, complete genomeUDP-glucose 4-epimerase, putative5e-1166.6
NC_015379:1887275:191240419124041913369966Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,NAD-dependent epimerase/dehydratase6e-1166.2
NC_008463:2017607:203919620391962040149954Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative NAD dependent epimerase/dehydratase1e-1065.1
NC_008639:2968000:300108130010813002040960Chlorobium phaeobacteroides DSM 266, complete genomeNAD-dependent epimerase/dehydratase3e-1063.9
NC_008781:3688965:369548636954863696433948Polaromonas naphthalenivorans CJ2, complete genomeNAD-dependent epimerase/dehydratase5e-1063.2
NC_011060:514874:554032554032555000969Pelodictyon phaeoclathratiforme BU-1, complete genomeNAD-dependent epimerase/dehydratase2e-0961.6
NC_016745:2785346:278962327896232790345723Oceanimonas sp. GK1 chromosome, complete genomeNAD-dependent epimerase/dehydratase2e-0961.2
NC_009524:263587:2705202705202720401521Psychrobacter sp. PRwf-1 chromosome, complete genomeNAD-dependent epimerase/dehydratase7e-0959.3
NC_009439:2038303:206568020656802066642963Pseudomonas mendocina ymp, complete genomeNAD-dependent epimerase/dehydratase2e-0858.2
NC_014733:107394:1137211137211147431023Methylovorus sp. MP688 chromosome, complete genomenad-dependent epimerase/dehydratase2e-0858.2
NC_011770:2046490:206654320665432067271729Pseudomonas aeruginosa LESB58, complete genomeORF_13; similar to NAD dependent epimerase/dehydratase family2e-0858.2
NC_008740:2905990:293933629393362940283948Marinobacter aquaeolei VT8, complete genomeNAD-dependent epimerase/dehydratase2e-0857.8
NC_014931:5088125:510010351001035101062960Variovorax paradoxus EPS chromosome, complete genomeNAD-dependent epimerase/dehydratase3e-0857
NC_009138:1138917:116755111675511168489939Herminiimonas arsenicoxydans, complete genomeUDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase)3e-0857
NC_017986:1128879:114731411473141148285972Pseudomonas putida ND6 chromosome, complete genomeUDP-sugar epimerase3e-0753.9
NC_018697:2055725:206786720678672068826960Cycloclasticus sp. P1 chromosome, complete genomeNAD dependent epimerase/dehydratase family5e-0753.1
NC_009659:2523874:252642925264292527367939Janthinobacterium sp. Marseille chromosome, complete genomenucleoside-diphosphate-sugar epimerase1e-0652.4
NC_007512:2024880:205584120558412056770930Pelodictyon luteolum DSM 273, complete genomeUDP-glucose 4-epimerase1e-0652
NC_013889:1623697:164265816426581643617960Thioalkalivibrio sp. K90mix chromosome, complete genomeNAD-dependent epimerase/dehydratase3e-0650.4
NC_013592:713036:751198751198752100903Dickeya dadantii Ech586, complete genomeNAD-dependent epimerase/dehydratase7e-0649.3
NC_012912:3853377:385640038564003857374975Dickeya zeae Ech1591, complete genomeNAD-dependent epimerase/dehydratase7e-0649.3