Pre_GI: BLASTP Hits

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Query: NC_016776:5174606:5224403 Bacteroides fragilis 638R, complete genome

Start: 5224403, End: 5225236, Length: 834

Host Lineage: Bacteroides fragilis; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This group of microbes constitute the most abundant members of the intestinal microflora of mammals. Typically they are symbionts, but they can become opportunistic pathogens in the peritoneal (intra-abdominal) cavity. Breakdown of complex plant polysaccharides such as cellulose and hemicellulose and host-derived polysaccharides such as mucopolysaccharides is aided by the many enzymes these organisms produce. Although only a minor component of the human gut microflora, this organism is a major component of clinical specimens and is the most common anaerobe isolated.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014933:220146:233293233293234129837Bacteroides helcogenes P 36-108 chromosome, complete genomeTetracycline regulation of excision, RteC6e-93340
NC_003228:2010643:202018820201882021024837Bacteroides fragilis NCTC 9343, complete genomehypothetical protein6e-93340
NC_009441:3562125:357810935781093579026918Flavobacterium johnsoniae UW101 chromosome, complete genomehypothetical protein3e-36152
NC_015177:1859879:186277718627771863598822Pedobacter saltans DSM 12145 chromosome, complete genomeTetracycline regulation of excision, RteC1e-35150
NC_017025:1761918:177995617799561780804849Flavobacterium indicum GPTSA100-9, complete genomehypothetical protein8e-35147
NC_015177:1859879:188401218840121884857846Pedobacter saltans DSM 12145 chromosome, complete genomeTetracycline regulation of excision, RteC6e-33141
NC_019904:2292954:229295422929542293799846Echinicola vietnamensis DSM 17526 chromosome, complete genomeRteC protein3e-23108
NC_016609:2951301:297888229788822979751870Niastella koreensis GR20-10 chromosome, complete genomeTetracycline regulation of excision, RteC4e-2098.6
NC_019904:5207309:522237052223705223209840Echinicola vietnamensis DSM 17526 chromosome, complete genomeRteC protein2e-1996.3
NC_014933:2240000:225409522540952254742648Bacteroides helcogenes P 36-108 chromosome, complete genomeTetracycline regulation of excision, RteC2e-1686.3
NC_016609:5890292:592262359226235923279657Niastella koreensis GR20-10 chromosome, complete genomeTetracycline regulation of excision, RteC4e-1168.9
NC_016610:1310275:133750013375001338117618Tannerella forsythia ATCC 43037 chromosome, complete genome8e-1064.3
NC_019968:1084288:110566611056661106040375Prevotella dentalis DSM 3688 chromosome 2, complete sequenceRteC protein1e-0963.5
NC_019968:1304450:131580113158011316175375Prevotella dentalis DSM 3688 chromosome 2, complete sequenceRteC protein2e-0963.2
NC_015571:1030527:104948510494851049844360Porphyromonas gingivalis TDC60, complete genomeRteC protein2e-0962.8
NC_002950:1511955:152938615293861529712327Porphyromonas gingivalis W83, complete genome3e-0962.4
NC_002950:879930:885950885950886276327Porphyromonas gingivalis W83, complete genome3e-0962.4
NC_019968:1084288:112744711274471127821375Prevotella dentalis DSM 3688 chromosome 2, complete sequenceRteC protein2e-0860.1
NC_015311:2626850:264412326441232644443321Prevotella denticola F0289 chromosome, complete genomeRteC protein2e-0859.7