Pre_GI: BLASTP Hits

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Query: NC_016582:9050528:9061091 Streptomyces bingchenggensis BCW-1 chromosome, complete genome

Start: 9061091, End: 9061573, Length: 483

Host Lineage: Streptomyces bingchenggensis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Streptomyces bingchenggensis BCW-1 was isolated from a soil sample collected in Harbin, China. This species produces milbemycins, a family of macrocyclic lactones widely used in human health, animal health, and crop protection. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014974:1076565:108904410890441089556513Thermus scotoductus SA-01 chromosome, complete genome3-phenylpropionate dioxygenase subunit beta3e-23107
NC_012521:148886:171604171604172167564Rhodococcus opacus B4 plasmid pROB02, complete sequencebenzene dioxygenase small subunit1e-22105
NC_009512:3251545:327106332710633271626564Pseudomonas putida F1, complete genomeToluene dioxygenase3e-22103
NC_009338:555587:565420565420565938519Mycobacterium gilvum PYR-GCK chromosome, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta2e-21101
NC_009077:1725683:176427717642771764795519Mycobacterium sp. JLS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit2e-21101
NC_008705:1790222:183420218342021834720519Mycobacterium sp. KMS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit2e-21101
NC_016604:3184855:321250332125033213021519Mycobacterium rhodesiae NBB3 chromosome, complete genomesmall subunit of phenylpropionate dioxygenase1e-2099
NC_010170:3944228:394901539490153949578564Bordetella petrii, complete genomechlorobenzene dioxygenase, small subunit of terminal oxygenase2e-2098.2
NC_008726:4725389:473961847396184740181564Mycobacterium vanbaalenii PYR-1, complete genomeBenzene 1,2-dioxygenase7e-2096.3
NC_014098:2971011:298169529816952982207513Bacillus tusciae DSM 2912 chromosome, complete genomearomatic-ring-hydroxylating dioxygenase beta subunit7e-2096.3
NC_009077:2308634:233356623335662334075510Mycobacterium sp. JLS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit1e-1892
NC_008146:1748026:177232417723241773034711Mycobacterium sp. MCS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit3e-1890.5
NC_008146:1748026:177900017790001779509510Mycobacterium sp. MCS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit4e-1890.1
NC_009338:555587:597217597217597726510Mycobacterium gilvum PYR-GCK chromosome, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta6e-1889.7
NC_015580:3252534:326749432674943268018525Novosphingobium sp. PP1Y, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta9e-1889.4
NC_009338:686932:691261691261691806546Mycobacterium gilvum PYR-GCK chromosome, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta9e-1889.4
NC_009077:2308634:233977223397722340281510Mycobacterium sp. JLS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit1e-1789
NC_009077:1687304:171084117108411711350510Mycobacterium sp. JLS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit1e-1789
NC_014814:132404:144338144338144937600Mycobacterium sp. Spyr1 chromosome, complete genomephthalate 3,4-dioxygenase, beta subunit3e-1787.4
NC_009077:1687304:170002217000221700621600Mycobacterium sp. JLS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit3e-1787.4
NC_009338:603663:620497620497621096600Mycobacterium gilvum PYR-GCK chromosome, complete genome3-phenylpropionate dioxygenase subunit beta6e-1786.7
NC_008726:494769:506675506675507271597Mycobacterium vanbaalenii PYR-1, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit6e-1786.7
NC_008146:1748026:176039217603921760988597Mycobacterium sp. MCS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit7e-1786.3
NC_008705:1752180:176454617645461765142597Mycobacterium sp. KMS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit7e-1786.3
NC_016604:3137694:315275531527553153318564Mycobacterium rhodesiae NBB3 chromosome, complete genomesmall subunit of phenylpropionate dioxygenase8e-1785.9
NC_009338:686932:703451703451704047597Mycobacterium gilvum PYR-GCK chromosome, complete genome3-phenylpropionate dioxygenase subunit beta2e-1685.1
NC_014098:2332938:234438223443822344882501Bacillus tusciae DSM 2912 chromosome, complete genomearomatic-ring-hydroxylating dioxygenase beta subunit3e-1684.3
NC_016947:1480282:148028214802821480869588Mycobacterium intracellulare MOTT-02 chromosome, complete genome3-phenylpropionate dioxygenase subunit beta8e-1682.8
NC_010170:1551923:156165215616521562170519Bordetella petrii, complete genomeBiphenyl dioxygenase small subunit2e-1581.6
NC_009338:630130:652080652080652634555Mycobacterium gilvum PYR-GCK chromosome, complete genome3-phenylpropionate dioxygenase subunit beta6e-1579.7
NC_009338:555587:578396578396578950555Mycobacterium gilvum PYR-GCK chromosome, complete genome3-phenylpropionate dioxygenase subunit beta6e-1579.7
NC_008726:549102:576122576122576676555Mycobacterium vanbaalenii PYR-1, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit6e-1579.7
NC_008705:1790222:181580418158041816358555Mycobacterium sp. KMS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit6e-1579.7
NC_009077:1725683:175126517512651751819555Mycobacterium sp. JLS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit6e-1579.7
NC_014814:169374:194290194290194844555Mycobacterium sp. Spyr1 chromosome, complete genomesmall subunit of phenylpropionate dioxygenase2e-1478.2
NC_016604:3184855:319944731994473200004558Mycobacterium rhodesiae NBB3 chromosome, complete genomesmall subunit of phenylpropionate dioxygenase4e-1477.4
NC_014814:169374:186725186725187267543Mycobacterium sp. Spyr1 chromosome, complete genomesmall subunit of phenylpropionate dioxygenase1e-1375.9
NC_016604:3184855:319191231919123192454543Mycobacterium rhodesiae NBB3 chromosome, complete genomesmall subunit of phenylpropionate dioxygenase2e-1375.1
NC_015563:1951368:196159219615921962110519Delftia sp. Cs1-4 chromosome, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta3e-1374.3
NC_009077:1725683:174370017437001744242543Mycobacterium sp. JLS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit3e-1374.3
NC_008705:1790222:180823918082391808781543Mycobacterium sp. KMS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit3e-1374.3
NC_008726:549102:568557568557569099543Mycobacterium vanbaalenii PYR-1, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit3e-1374.3
NC_008146:1748026:180520618052061805748543Mycobacterium sp. MCS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit3e-1374.3
NC_009338:555587:585973585973586515543Mycobacterium gilvum PYR-GCK chromosome, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta3e-1374.3
NC_009338:630130:659657659657660199543Mycobacterium gilvum PYR-GCK chromosome, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta3e-1374.3
NC_021171:2019755:203256220325622033143582Bacillus sp. 1NLA3E, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta2e-1374.3
NC_008782:3252092:326343132634313264015585Acidovorax sp. JS42, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit6e-1270.1
NC_008781:2611702:262216926221692622753585Polaromonas naphthalenivorans CJ2, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit1e-1065.5
NC_017506:1:251792517925754576Marinobacter adhaerens HP15 chromosome, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta2e-1065.1
NC_009077:1687304:171871617187161719126411Mycobacterium sp. JLS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit3e-1064.3
NC_017904:1763015:176301517630151763545531Mycobacterium sp. MOTT36Y chromosome, complete genomebeta subunit of hydroxylase component of benzoate 1,2-dioxygenase1e-0962.4
NC_011961:304158:327674327674328228555Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence3-phenylpropionate dioxygenase subunit beta (Digoxigenin subunit beta)3e-0960.8
NC_008699:857837:870239870239870829591Nocardioides sp. JS614, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit2e-0858.5
NC_005244:37546:572215722157805585Pseudomonas sp. ND6 plasmid pND6-1, complete sequencenaphthalene dioxygenase Fe-S protein small subunit2e-0858.5
NC_007181:1856455:187801918780191878531513Sulfolobus acidocaldarius DSM 639, complete genomearomatic ring dioxygenase subunit B2e-0858.2
NC_016604:3184855:320491632049163205428513Mycobacterium rhodesiae NBB3 chromosome, complete genomesmall subunit of phenylpropionate dioxygenase2e-0858.2
NC_011740:1494796:151994015199401520425486Escherichia fergusonii ATCC 35469, complete genomebenzoate 1,2-dioxygenase beta subunit3e-0857.8
NC_009512:3282500:328607032860703286612543Pseudomonas putida F1, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit5e-0857
NC_015434:1313979:132035113203511320878528Verrucosispora maris AB-18-032 chromosome, complete genomep-cumate dioxygenase small subunit7e-0856.6
NC_008705:1790222:182660918266091827121513Mycobacterium sp. KMS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit6e-0856.6
NC_009077:1725683:175668417566841757196513Mycobacterium sp. JLS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit6e-0856.6
NC_009338:555587:573019573019573531513Mycobacterium gilvum PYR-GCK chromosome, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta6e-0856.6
NC_009338:630130:646703646703647215513Mycobacterium gilvum PYR-GCK chromosome, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta6e-0856.6
NC_015554:4002952:400756740075674008154588Alteromonas sp. SN2 chromosome, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta5e-0856.6
NC_016147:2820232:283650328365032837018516Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeputative dioxygenase component subunit beta3e-0754.7
NC_007492:3384077:340444434044443404929486Pseudomonas fluorescens PfO-1, complete genomeAromatic-ring-hydroxylating dioxygenase, beta subunit9e-0752.8
NC_009077:4419084:443164844316484432247600Mycobacterium sp. JLS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit9e-0752.8
NC_013769:826933:833551833551834063513Sulfolobus islandicus L.D.8.5 chromosome, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta1e-0652.4
NC_017275:698854:715064715064715576513Sulfolobus islandicus HVE10/4 chromosome, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta1e-0652.4
NC_014834:614890:654379654379654879501Rhodopseudomonas palustris DX-1 chromosome, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta2e-0652
NC_018697:505915:513034513034513525492Cycloclasticus sp. P1 chromosome, complete genomeBenzoate 1,2-dioxygenase small subunit5e-0650.1