Pre_GI: BLASTP Hits

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Query: NC_016445:338288:356005 Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete

Start: 356005, End: 357513, Length: 1509

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016944:859492:8740298740298770343006Vibrio cholerae IEC224 chromosome I, complete sequenceToxR-activated gene A protein01040
NC_012668:2744393:2783790278379027868313042Vibrio cholerae MJ-1236 chromosome 1, complete sequenceToxR-activated gene A protein01039
NC_012578:818241:8344268344268374673042Vibrio cholerae M66-2 chromosome I, complete sequenceToxR-activated gene A protein01039
NC_002505:860789:8769748769748800153042Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeToxR-activated gene A protein01039
NC_012582:882931:8991168991169021573042Vibrio cholerae O395 chromosome chromosome I, complete sequenceToxR-activated gene A protein01035
NC_009457:351512:3676973676973707383042Vibrio cholerae O395 chromosome 2, complete sequenceToxR-activated gene A protein01035
NC_014366:1435785:1454008145400814574903483Gamma proteobacterium HdN1, complete genomesimilar to toxr-activated gene A protein, TagA3e-0963.9