Pre_GI: BLASTP Hits

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Query: NC_016445:2938887:2958194 Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete

Start: 2958194, End: 2959426, Length: 1233

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012668:62500:7195071950731821233Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein0834
NC_002505:514732:5471585471585483901233Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein0834
NC_004547:2810151:2814296281429628155131218Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative signal transduction protein3e-44179
NC_016803:2431672:2431672243167224329221251Desulfovibrio desulfuricans ND132 chromosome, complete genomediguanylate phosphodiesterase7e-43174
NC_011901:342777:3650433650433662541212Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completesignal transduction protein2e-40167
NC_006322:3198829:3211668321166832128881221Bacillus licheniformis ATCC 14580, complete genomeYuxH5e-39162
NC_014972:3688000:3688057368805736892801224Desulfobulbus propionicus DSM 2032 chromosome, complete genomediguanylate phosphodiesterase6e-36152
NC_015222:1607757:1618718161871816199561239Nitrosomonas sp. AL212 chromosome, complete genomediguanylate phosphodiesterase metal dependent hydrolase domain2e-31137
NC_015731:990000:1010125101012510113631239Nitrosomonas sp. Is79A3 chromosome, complete genomediguanylate phosphodiesterase with metal dependent hydrolase domain7e-31135
NC_018704:176088:1784791784791797171239Amphibacillus xylanus NBRC 15112, complete genomehypothetical protein3e-29129
NC_016616:3585435:3585435358543535866971263Dechlorosoma suillum PS chromosome, complete genomeputative signal transduction protein containing EAL and modified HD-GYP domains2e-28127
NC_014614:6115:88628862100791218Clostridium sticklandii, complete genomeputative phosphodiesterase2e-26120
NC_013223:2279869:2285460228546022867041245Desulfohalobium retbaense DSM 5692, complete genomediguanylate phosphodiesterase1e-21104
NC_012724:2611000:2612949261294926141811233Burkholderia glumae BGR1 chromosome 1, complete genomeDiguanylate phosphodiesterase8e-21101
NC_010730:1519458:1523191152319115244021212Sulfurihydrogenibium sp. YO3AOP1, complete genomeputative signal transduction protein8e-2098.6
NC_012721:2406874:2424528242452824256821155Burkholderia glumae BGR1 chromosome 2, complete genomeDiguanylate phosphodiesterase2e-1790.5
NC_012440:585568:5855685855685875321965Persephonella marina EX-H1, complete genomeresponse regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor3e-0653.1
NC_016002:1048420:1051518105151810529331416Pseudogulbenkiania sp. NH8B, complete genomeputative signal transduction protein1e-0551.6