Pre_GI: BLASTP Hits

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Query: NC_016445:2938887:2955416 Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete

Start: 2955416, End: 2956213, Length: 798

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012668:62500:751637516375978816Vibrio cholerae MJ-1236 chromosome 1, complete sequenceAraC family transcriptional regulator4e-135480
NC_002505:514732:544362544362545177816Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetranscriptional regulator, AraC/XylS family3e-134477
NC_005139:2201820:225498422549842255754771Vibrio vulnificus YJ016 chromosome I, complete sequenceAraC-type DNA-binding domain-containing protein3e-1892.4
NC_009901:1516340:152043815204381521247810Shewanella pealeana ATCC 700345, complete genometranscriptional regulator, AraC family3e-1065.5
NC_010334:1561691:156569015656901566499810Shewanella halifaxensis HAW-EB4, complete genometranscriptional regulator, AraC family4e-1065.1
NC_018697:505915:5090685090685100901023Cycloclasticus sp. P1 chromosome, complete genomeAraC-family transcriptional regulator3e-0962.4
NC_004603:370320:378312378312379037726Vibrio parahaemolyticus RIMD 2210633 chromosome I, completeputative CFA/I fimbrial subunit D5e-0755.1
NC_013508:3593000:359718135971813597945765Edwardsiella tarda EIB202, complete genomeAraC-type DNA-binding domain-containing protein3e-0652.4
NC_012779:3652737:366065036606503661414765Edwardsiella ictaluri 93-146, complete genomeporin thermoregulatory protein EnvY4e-0652.4