Pre_GI: BLASTP Hits

Some Help

Query: NC_015975:267994:268919 Lactobacillus ruminis ATCC 27782 chromosome, complete genome

Start: 268919, End: 269455, Length: 537

Host Lineage: Lactobacillus ruminis; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This organism was isolated from bovine rumen. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012803:2195808:223723222372322237741510Micrococcus luteus NCTC 2665, complete genomerrf2 family protein, putative transcriptional regulator3e-1271.2
NC_020244:3681236:370137737013773701847471Bacillus subtilis XF-1, complete genomeputative transcriptional regulator5e-1270.5
NC_011881:89705:973919739197885495Arthrobacter chlorophenolicus A6 plasmid pACHL02, completetranscriptional regulator, BadM/Rrf2 family6e-1063.5
NC_011881:89705:953589535895843486Arthrobacter chlorophenolicus A6 plasmid pACHL02, completetranscriptional regulator, BadM/Rrf2 family8e-1063.2
NC_015589:2480365:248474324847432485153411Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeRrf2 family transcriptional regulator2e-0962
NC_009848:720510:742990742990743427438Bacillus pumilus SAFR-032, complete genometranscriptional regulator4e-0857.8
NC_012658:3678000:368338836833883683789402Clostridium botulinum Ba4 str. 657 chromosome, complete genomeRRF2 family protein4e-0857.8
NC_010520:3674883:369132836913283691729402Clostridium botulinum A3 str. Loch Maree, complete genomeputative transcriptional regulator4e-0857.4
NC_009483:2489000:252245825224582522871414Geobacter uraniireducens Rf4 chromosome, complete genomeBadM/Rrf2 family transcriptional regulator5e-0857.4
NC_011146:3537546:354820635482063548694489Geobacter bemidjiensis Bem, complete genometranscriptional regulator, BadM/Rrf2 family2e-0755.5
NC_010501:2609567:263382326338232634362540Pseudomonas putida W619, complete genometranscriptional regulator, BadM/Rrf2 family2e-0755.5
NC_013520:571647:586930586930587361432Veillonella parvula DSM 2008, complete genometranscriptional regulator, BadM/Rrf2 family2e-0755.1
NC_014364:2246524:228335622833562283736381Spirochaeta smaragdinae DSM 11293 chromosome, complete genometranscriptional regulator, BadM/Rrf2 family3e-0754.7
NC_011979:2892119:289631228963122896725414Geobacter sp. FRC-32, complete genometranscriptional regulator, BadM/Rrf2 family4e-0754.3
NC_020064:3998715:408478040847804085310531Serratia marcescens FGI94, complete genomerrf2 family protein, putative transcriptional regulator7e-0753.5
NC_015589:626321:641545641545641970426Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeRrf2 family transcriptional regulator6e-0753.5
NC_008262:1950205:195474719547471955208462Clostridium perfringens SM101, complete genomeuncharacterized conserved protein of YjeB/RRF2 family3e-0651.2
NC_017188:461177:478328478328478831504Bacillus amyloliquefaciens TA208 chromosome, complete genometranscriptional regulator6e-0650.4
NC_020272:20435:261892618926692504Bacillus amyloliquefaciens IT-45, complete genomeHTH-type transcriptional regulator iscR7e-0650.1
NC_013891:575746:587430587430587846417Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomeRrf2 family transcriptional regulator protein8e-0650.1
NC_014844:2158318:215831821583182158755438Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeRrf2 family transcriptional regulator1e-0549.7