Pre_GI: BLASTP Hits

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Query: NC_015733:4253961:4257660 Pseudomonas putida S16 chromosome, complete genome

Start: 4257660, End: 4258877, Length: 1218

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009439:3104000:3105512310551231067411230Pseudomonas mendocina ymp, complete genomePAS/PAC sensor signal transduction histidine kinase4e-131468
NC_007912:2768363:2788334278833427896621329Saccharophagus degradans 2-40, complete genometwo-component sensor5e-66251
NC_008228:3679949:3681297368129736824931197Pseudoalteromonas atlantica T6c, complete genomehistidine kinase9e-61234
NC_009092:1504363:1572027157202715731151089Shewanella loihica PV-4, complete genomePAS/PAC sensor signal transduction histidine kinase3e-57222
NC_016745:2913712:2915037291503729160741038Oceanimonas sp. GK1 chromosome, complete genometwo-component system flagellar sensor histidine kinase FlrB1e-50201
NC_015850:1497998:1519143151914315203481206Acidithiobacillus caldus SM-1 chromosome, complete genomeflagellar sensor histidine kinase fleS9e-27121
NC_014355:2210884:2229593222959322308821290Candidatus Nitrospira defluvii, complete genomeputative sensor histidine kinase FleS3e-22106
NC_008095:7139056:7161080716108071626571578Myxococcus xanthus DK 1622, complete genomepilin regulatory protein PilS5e-21102
NC_020409:621792:6641886641886660291842Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeSignal transduction histidine kinase, nitrogen specific, NtrB2e-20100
NC_009253:1381401:1401610140161014034541845Desulfotomaculum reducens MI-1 chromosome, complete genomesensory histidine kinase AtoS1e-1584.7
NC_007498:2475781:2497688249768824993671680Pelobacter carbinolicus DSM 2380, complete genometwo component signal transduction histidine kinase2e-1583.6
NC_009454:1462930:1480137148013714825272391Pelotomaculum thermopropionicum SI, complete genomehypothetical protein2e-1583.6
NC_015690:6521740:6522775652277565263713597Paenibacillus mucilaginosus KNP414 chromosome, complete genomesignal transduction histidine kinase with CheB and CheR activity9e-1581.6
NC_020291:1389114:1396660139666013983661707Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomealkaline phosphatase synthesis sensor protein PhoR1e-1481.6
NC_019897:3810000:3830137383013738319901854Thermobacillus composti KWC4 chromosome, complete genomePAS domain-containing protein5e-1479.3
NC_015690:7334786:7356867735686773584261560Paenibacillus mucilaginosus KNP414 chromosome, complete genometwo-component sensor histidine kinase2e-1377.4
NC_014355:3248386:3248386324838632515623177Candidatus Nitrospira defluvii, complete genomeputative histidine kinase3e-1376.6
NC_002939:1634843:1639032163903216406841653Geobacter sulfurreducens PCA, complete genomesensory box histidine kinase1e-1274.7
NC_003919:3812778:3812778381277838143911614Xanthomonas axonopodis pv. citri str. 306, complete genometwo-component system sensor protein1e-1274.3
NC_007508:3835000:3835068383506838366811614Xanthomonas campestris pv. vesicatoria str. 85-10, complete genometwo-component system sensor protein PilS2e-1273.9
NC_015714:542679:5580945580945592841191Treponema paraluiscuniculi Cuniculi A chromosome, complete genomesensor histidine kinase2e-1273.9
NC_019896:2579036:2598041259804125998611821Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeStage II sporulation protein J3e-1273.6
NC_008607:11663:1909119091202091119Pelobacter propionicus DSM 2379 plasmid pPRO1, complete sequenceintegral membrane sensor signal transduction histidine kinase3e-1273.6
NC_014973:4503054:4510499451049945131352637Geobacter sp. M18 chromosome, complete genomemulti-sensor signal transduction histidine kinase3e-1273.2
NC_016803:198178:1995781995782019742397Desulfovibrio desulfuricans ND132 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase5e-1272.4
NC_010424:697187:7072207072207097872568Candidatus Desulforudis audaxviator MP104C, complete genomemulti-sensor signal transduction histidine kinase6e-1272.4
NC_014972:480355:4906254906254917551131Desulfobulbus propionicus DSM 2032 chromosome, complete genomehistidine kinase1e-1171.6
NC_007946:3683371:3703026370302637044021377Escherichia coli UTI89, complete genomesensor protein ZraS1e-1171.2
NC_014836:2919508:2923938292393829251041167Desulfurispirillum indicum S5 chromosome, complete genomePAS sensor protein2e-1170.5
NC_002939:1021297:1036181103618110381481968Geobacter sulfurreducens PCA, complete genomesensor histidine kinase3e-1170.1
NC_014377:1400544:1422710142271014244701761Thermosediminibacter oceani DSM 16646 chromosome, complete genomemulti-sensor signal transduction histidine kinase4e-1169.7
NC_007517:1561466:1563822156382215654651644Geobacter metallireducens GS-15, complete genomesignal transduction histidine kinase, nitrogen specific, NtrB4e-1169.7
NC_015947:3539472:3539472353947235410851614Burkholderia sp. JV3 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase5e-1169.3
NC_011979:1683964:1689108168910816902111104Geobacter sp. FRC-32, complete genomehistidine kinase5e-1169.3
NC_021171:1661923:1665770166577016670081239Bacillus sp. 1NLA3E, complete genomeintegral membrane sensor signal transduction histidine kinase8e-1168.6
NC_013959:2666321:2678086267808626797111626Sideroxydans lithotrophicus ES-1 chromosome, complete genomemulti-sensor signal transduction histidine kinase1e-1068.2
NC_011071:3544450:3544450354445035462281779Stenotrophomonas maltophilia R551-3, complete genomeintegral membrane sensor signal transduction histidine kinase1e-1067.8
NC_011901:2739984:2759256275925627608511596Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehistidine kinase2e-1067.4
NC_008609:3672653:3700534370053437019761443Pelobacter propionicus DSM 2379, complete genomeintegral membrane sensor signal transduction histidine kinase3e-1067
NC_010814:1390817:1410561141056114127742214Geobacter lovleyi SZ, complete genomemulti-sensor signal transduction histidine kinase3e-1066.6
NC_016935:789849:7945857945857967802196Paenibacillus mucilaginosus 3016 chromosome, complete genometwo-component sensor histidine kinase4e-1066.2
NC_015690:790500:7950537950537972542202Paenibacillus mucilaginosus KNP414 chromosome, complete genometwo-component sensor histidine kinase5e-1065.9
NC_014623:5350116:5368481536848153706552175Stigmatella aurantiaca DW4/3-1 chromosome, complete genomesensor protein5e-1065.9
NC_006177:2211458:2227339222733922295042166Symbiobacterium thermophilum IAM 14863, complete genometwo-component hybrid sensor and regulator6e-1065.9
NC_008609:708886:7379777379777401932217Pelobacter propionicus DSM 2379, complete genomemulti-sensor signal transduction histidine kinase1e-0965.1
NC_016633:3069518:3073914307391430752931380Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomesignal transduction histidine kinase2e-0964.3
NC_013887:213699:2302912302912321861896Methanocaldococcus sp. FS406-22 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase2e-0963.9
NC_018870:484000:5046165046165060581443Thermacetogenium phaeum DSM 12270 chromosome, complete genomealkaline phosphatase synthesis sensor protein PhoR3e-0963.2
NC_012918:2277500:2297983229798323000012019Geobacter sp. M21 chromosome, complete genomehistidine kinase5e-0962.8
NC_007759:964000:9794079794079816292223Syntrophus aciditrophicus SB, complete genomesignal transduction histidine kinase involved in nitrogen metabolism regulation7e-0962
NC_016629:3496630:3515213351521335170571845Desulfovibrio africanus str. Walvis Bay chromosome, completemulti-sensor signal transduction histidine kinase8e-0962
NC_012881:4097552:4114930411493041171222193Desulfovibrio salexigens DSM 2638, complete genomePAS/PAC sensor signal transduction histidine kinase2e-0860.8
NC_010505:400950:4025894025894044511863Methylobacterium radiotolerans JCM 2831, complete genomeintegral membrane sensor signal transduction histidine kinase3e-0859.7
NC_010628:675445:6979676979676993731407Nostoc punctiforme PCC 73102, complete genomecyclic nucleotide modulated signal transduction histidine kinase5e-0859.3
NC_019977:1245894:1251178125117812536942517Methanomethylovorans hollandica DSM 15978, complete genomePAS domain S-box6e-0858.9
NC_017096:779550:7837897837897851711383Caldisericum exile AZM16c01, complete genometwo-component system sensor histidine kinase7e-0858.9
NC_014761:2248000:2248010224801022492691260Oceanithermus profundus DSM 14977 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase7e-0858.9
NC_017268:546376:561786561786562196411Treponema pallidum subsp. pallidum str. Chicago chromosome,7e-0858.5
NC_018515:3865522:3867116386711638689331818Desulfosporosinus meridiei DSM 13257 chromosome, complete genomesignal transduction histidine kinase8e-0858.5
NC_017506:2089769:2110128211012821119721845Marinobacter adhaerens HP15 chromosome, complete genomesensor histidine kinase9e-0858.5
NC_008609:1976403:2056927205692720599112985Pelobacter propionicus DSM 2379, complete genomemulti-sensor hybrid histidine kinase1e-0758.5
NC_010162:3275265:3277127327712732781521026Sorangium cellulosum 'So ce 56', complete genomeputative sensor kinase1e-0757.8
NC_013501:1140390:1161733116173311648223090Rhodothermus marinus DSM 4252, complete genomemulti-sensor signal transduction histidine kinase7e-0755.5
NC_008260:497855:5128265128265144601635Alcanivorax borkumensis SK2, complete genometwo-component sensor histidine kinase8e-0755.1
NC_015711:570910:5907765907765922691494Myxococcus fulvus HW-1 chromosome, complete genomedevelopmental sensor histidine kinase SasS1e-0654.7
NC_007508:237771:2714342714342728761443Xanthomonas campestris pv. vesicatoria str. 85-10, complete genometwo-component system sensor histidine kinase3e-0653.1
NC_011662:386162:4375664375664390141449Thauera sp. MZ1T, complete genomeintegral membrane sensor signal transduction histidine kinase5e-0652.8
NC_013642:1425795:1437671143767114399382268Thermotoga naphthophila RKU-10, complete genomemulti-sensor signal transduction histidine kinase9e-0651.6
NC_010483:1467616:1477860147786014801272268Thermotoga sp. RQ2, complete genomePAS/PAC sensor signal transduction histidine kinase9e-0651.6
NC_013722:3081459:3082781308278130842171437Xanthomonas albilineans, complete genomeprobable two-component system sensor protein1e-0551.6