Pre_GI: BLASTP Hits

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Query: NC_014169:2407266:2420720 Bifidobacterium longum subsp. longum JDM301 chromosome, complete

Start: 2420720, End: 2421928, Length: 1209

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014656:1704101:1709339170933917105471209Bifidobacterium longum subsp. longum BBMN68 chromosome, completenagc-type transcriptional regulator0783
NC_013235:1938889:1942767194276719439271161Nakamurella multipartita DSM 44233, complete genomeROK family protein2e-26120
NC_014246:288847:3021843021843034341251Mobiluncus curtisii ATCC 43063 chromosome, complete genomeROK family protein2e-1790.1
NC_015519:801929:8051658051658063551191Tepidanaerobacter sp. Re1 chromosome, complete genomeglucokinase5e-1582.4
NC_003155:2730469:2736105273610527373041200Streptomyces avermitilis MA-4680, complete genomeROK-family transcriptional regulator1e-1481.6
NC_003888:6568000:6588242658824265894531212Streptomyces coelicolor A3(2), complete genomeprobable transcriptional repressor protein1e-1481.3
NC_013929:2375613:2383101238310123843121212Streptomyces scabiei 87.22 chromosome, complete genometranscriptional repressor4e-1479.7
NC_018750:6315802:6331621633162163328411221Streptomyces venezuelae ATCC 10712, complete genomeN-acetylmannosamine kinase2e-1377.4
NC_014829:1154520:1167868116786811690911224Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeROK family protein2e-1377.4
NC_009348:3029963:3033675303367530348891215Aeromonas salmonicida subsp. salmonicida A449, complete genomeN-acetylglucosamine repressor3e-1376.6
NC_015519:801929:806377806377807333957Tepidanaerobacter sp. Re1 chromosome, complete genomeROK family glucokinase4e-1376.3
NC_012669:1700626:1704617170461717058491233Beutenbergia cavernae DSM 12333, complete genomeROK family protein5e-1375.9
NC_015953:5908467:5921153592115359223521200Streptomyces sp. SirexAA-E chromosome, complete genomeROK family protein6e-1375.5
NC_014931:6203872:6243214624321462443711158Variovorax paradoxus EPS chromosome, complete genomeROK family protein7e-1375.5
NC_016114:1435436:1441008144100814422401233Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeROK family protein8e-1375.1
NC_021177:6662668:6675017667501766762281212Streptomyces fulvissimus DSM 40593, complete genomeROK family protein2e-1274.3
NC_013714:2350749:2355017235501723561891173Bifidobacterium dentium Bd1, complete genomeN-acetylglucosamine repressor1e-1274.3
NC_010572:1748668:1754399175439917555981200Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative ROK-family transcriptional regulator1e-1274.3
NC_012848:320883:3261623261623274361275Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501,ROK family protein3e-1273.2
NC_015953:5865733:5898549589854958997781230Streptomyces sp. SirexAA-E chromosome, complete genomeROK family protein4e-1272.8
NC_014838:175939:1995041995042006371134Pantoea sp. At-9b plasmid pPAT9B01, complete sequenceROK family protein3e-1169.7
NC_007644:416000:4239874239874252191233Moorella thermoacetica ATCC 39073, complete genomeROK1e-1068.2
NC_011899:2481229:2483324248332424845141191Halothermothrix orenii H 168, complete genomeROK family protein5e-1065.9
NC_012691:241404:2476052476052487741170Tolumonas auensis DSM 9187, complete genomeROK family protein7e-1065.5
NC_016633:1898234:1903146190314619043481203Sphaerochaeta pleomorpha str. Grapes chromosome, complete genometranscriptional regulator/sugar kinase1e-0964.7
NC_010175:1531212:1538807153880715400331227Chloroflexus aurantiacus J-10-fl, complete genomeROK family protein3e-0963.5
NC_010003:903433:9034339034339045901158Petrotoga mobilis SJ95, complete genomeROK family protein2e-0963.5
NC_013739:5705325:5710409571040957116231215Conexibacter woesei DSM 14684, complete genomeROK family protein4e-0962.8
NC_012914:5938566:5942383594238359435461164Paenibacillus sp. JDR-2, complete genomeROK family protein5e-0962.8
NC_014500:2402881:2403912240391224051291218Dickeya dadantii 3937 chromosome, complete genomeDNA-binding transcriptional repressor1e-0861.2
NC_014169:2353711:2355560235556023567651206Bifidobacterium longum subsp. longum JDM301 chromosome, completeROK family protein2e-0860.8
NC_014364:3238374:3248822324882232500601239Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeROK family protein2e-0860.8
NC_017168:3192817:3210724321072432119411218Yersinia pestis A1122 chromosome, complete genomeputative ROK family transcriptional regulator3e-0859.7
NC_013093:2547608:2555558255555825567271170Actinosynnema mirum DSM 43827, complete genomeROK family protein4e-0859.7
NC_016111:5181475:5180324518032451814781155Streptomyces cattleya NRRL 8057, complete genomeglucokinase4e-0859.7
NC_011898:3973627:3992304399230439935031200Clostridium cellulolyticum H10, complete genomeROK family protein8e-0858.5
NC_012491:743883:746835746835747809975Brevibacillus brevis NBRC 100599, complete genomeglucokinase2e-0757.4
NC_013526:835117:8411018411018423571257Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeROK family protein2e-0757.4
NC_007333:1743890:1853339185333918545921254Thermobifida fusca YX, complete genomeputative xylose repressor4e-0756.2
NC_013508:1491945:149355514935551494424870Edwardsiella tarda EIB202, complete genomeN-acetylmannosamine kinase5e-0756.2
NC_014479:1831404:1844341184434118454951155Bacillus subtilis subsp. spizizenii str. W23 chromosome, completenegative transcriptional regulator5e-0756.2
NC_019842:1847081:1859562185956218607161155Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein6e-0755.8
NC_009725:1787262:1800029180002918011831155Bacillus amyloliquefaciens FZB42, complete genomeXylR6e-0755.8
NC_015520:2859820:2875564287556428767811218Mahella australiensis 50-1 BON chromosome, complete genomeROK family protein7e-0755.5
NC_020410:1781884:1797417179741717985711155Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completetranscriptional regulator1e-0654.7
NC_020244:1875834:1896395189639518975581164Bacillus subtilis XF-1, complete genomexylose repressor1e-0654.7
NC_017188:1567000:1594469159446915956231155Bacillus amyloliquefaciens TA208 chromosome, complete genomenegative transcriptional regulator1e-0654.7
NC_017190:1832402:1847161184716118483151155Bacillus amyloliquefaciens LL3 chromosome, complete genomeXylose repressor1e-0654.7
NC_017191:1568369:1595773159577315969271155Bacillus amyloliquefaciens XH7 chromosome, complete genometranscriptional regulator/sugar kinase1e-0654.7
NC_012785:1988527:200581720058172006761945Kosmotoga olearia TBF 19.5.1, complete genomeROK family protein2e-0654.3
NC_017195:1852935:1871695187169518728491155Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completexylose repressor2e-0654.3
NC_020418:1397112:141334114133411414210870Morganella morganii subsp. morganii KT, complete genomeN-acetylmannosamine kinase2e-0653.9
NC_002932:2142000:664066407563924Chlorobium tepidum TLS, complete genomeRok family protein2e-0653.9
NC_013510:3117837:3117837311783731190631227Thermomonospora curvata DSM 43183, complete genomeROK family protein2e-0653.9
NC_015675:1721543:1744359174435917458281470Mesorhizobium opportunistum WSM2075 chromosome, complete genomeROK family protein2e-0653.5
NC_002678:7004370:7026272702627270274381167Mesorhizobium loti MAFF303099, complete genometranscriptional regulator3e-0653.5
NC_007333:1743890:1858297185829718595471251Thermobifida fusca YX, complete genomeputative xylose repressor3e-0653.5
NC_010321:2207364:221454822145482215495948Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeROK family glucokinase4e-0653.1
NC_010320:33814:536015360154548948Thermoanaerobacter sp. X514 chromosome, complete genomeROK family glucokinase4e-0653.1
NC_014964:2199252:220169322016932202640948Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeglucokinase, ROK family4e-0653.1
NC_014538:73272:934669346694413948Thermoanaerobacter sp. X513 chromosome, complete genomeglucokinase, ROK family4e-0653.1
NC_019973:1731626:1754410175441017558821473Mesorhizobium australicum WSM2073, complete genometranscriptional regulator/sugar kinase5e-0652.4
NC_014963:558000:568303568303569238936Terriglobus saanensis SP1PR4 chromosome, complete genomeROK family protein7e-0652
NC_003098:586941:600133600133601110978Streptococcus pneumoniae R6, complete genomeGlucose kinase7e-0652
NC_010582:620400:633043633043634020978Streptococcus pneumoniae CGSP14, complete genomeglucokinase7e-0652
NC_012778:2049694:206003920600392060980942Eubacterium eligens ATCC 27750, complete genomeglucokinase8e-0652
NC_004369:2203947:220484122048412205809969Corynebacterium efficiens YS-314, complete genomeglucose kinase8e-0652
NC_008533:592000:607682607682608641960Streptococcus pneumoniae D39, complete genomeglucokinase9e-0651.6
NC_012466:590883:605717605717606676960Streptococcus pneumoniae JJA, complete genomeglucokinase (Glucose kinase)9e-0651.6
NC_014246:611275:6318586318586331861329Mobiluncus curtisii ATCC 43063 chromosome, complete genometranscriptional repressor1e-0551.6