Pre_GI: BLASTP Hits

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Query: NC_014169:1909482:1926538 Bifidobacterium longum subsp. longum JDM301 chromosome, complete

Start: 1926538, End: 1927887, Length: 1350

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011978:699500:7169587169587182921335Thermotoga neapolitana DSM 4359, complete genomeXylose isomerase2e-142505
NC_010320:143109:1506181506181519341317Thermoanaerobacter sp. X514 chromosome, complete genomexylose isomerase8e-139494
NC_014538:187747:1904841904841918001317Thermoanaerobacter sp. X513 chromosome, complete genomexylose isomerase8e-139494
NC_006510:1901954:1901954190195419032911338Geobacillus kaustophilus HTA426, complete genomexylose isomerase8e-137487
NC_017195:1852935:1873091187309118744281338Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completexylose isomerase9e-137487
NC_020210:1908000:1909932190993219112691338Geobacillus sp. GHH01, complete genomexylose isomerase7e-136484
NC_014650:2143033:2158878215887821602031326Geobacillus sp. Y4.1MC1 chromosome, complete genomexylose isomerase5e-136484
NC_011898:3973627:3990923399092339922421320Clostridium cellulolyticum H10, complete genomexylose isomerase4e-136484
NC_014206:1745203:1766446176644617677831338Geobacillus sp. C56-T3 chromosome, complete genomexylose isomerase3e-135481
NC_010003:225420:2324592324592337751317Petrotoga mobilis SJ95, complete genomexylose isomerase9e-135480
NC_017188:1567000:1592862159286215941991338Bacillus amyloliquefaciens TA208 chromosome, complete genomexylose isomerase3e-134479
NC_017190:1832402:1848585184858518499221338Bacillus amyloliquefaciens LL3 chromosome, complete genomeXylose isomerase3e-134479
NC_017191:1568369:1594166159416615955031338Bacillus amyloliquefaciens XH7 chromosome, complete genomexylose isomerase3e-134479
NC_020410:1781884:1798834179883418001711338Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completexylose isomerase4e-134478
NC_019842:1847081:1860980186098018623171338Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,xylose isomerase3e-133475
NC_009725:1787262:1801447180144718027841338Bacillus amyloliquefaciens FZB42, complete genomeXylA8e-133474
NC_019896:2158223:2176407217640721777441338Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completexylose isomerase2e-132473
NC_020272:2077795:2099488209948821008251338Bacillus amyloliquefaciens IT-45, complete genomexylose isomerase1e-132473
NC_016047:1978312:1992284199228419936211338Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completexylose isomerase3e-132472
NC_020244:1875834:1897797189779718991341338Bacillus subtilis XF-1, complete genomexylose isomerase3e-132472
NC_014479:1831404:1845754184575418470911338Bacillus subtilis subsp. spizizenii str. W23 chromosome, completexylose isomerase1e-131470
NC_014976:17909:1790917909192461338Bacillus subtilis BSn5 chromosome, complete genomexylose isomerase1e-131469
NC_000964:1873398:1891116189111618924531338Bacillus subtilis subsp. subtilis str. 168, complete genomexylose isomerase3e-131468
NC_014041:3229867:3245682324568232469921311Zunongwangia profunda SM-A87 chromosome, complete genomexylose isomerase7e-111400
NC_015732:3105649:3105649310564931069921344Spirochaeta caldaria DSM 7334 chromosome, complete genomeXylose isomerase6e-109394
NC_010162:7620000:7625761762576176270921332Sorangium cellulosum 'So ce 56', complete genomexylose isomerase1e-107390
NC_015224:4426167:4444682444468244460011320Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,xylose isomerase1e-106386
NC_006905:3780000:3800105380010538014271323Salmonella enterica subsp. enterica serovar Choleraesuis strxylose isomerase1e-105383
NC_008800:4488112:4509849450984945111681320Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,xylose isomerase3e-105382
NC_017160:4508000:4527070452707045283891320Yersinia pestis D182038 chromosome, complete genomexylose isomerase1e-102374
NC_008150:4634695:4649076464907646503951320Yersinia pestis Antiqua, complete genomexylose isomerase1e-102374
NC_010465:62348:6234862348636671320Yersinia pseudotuberculosis YPIII, complete genomexylose isomerase1e-102374
NC_012731:600518:6575606575606588791320Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomexylose isomerase4e-102372
NC_011283:4966471:4968123496812349694421320Klebsiella pneumoniae 342 chromosome, complete genomexylose isomerase3e-102372
NC_013850:4829455:4831108483110848324271320Klebsiella variicola At-22 chromosome, complete genomexylose isomerase3e-102372
NC_007952:444616:4624634624634637851323Burkholderia xenovorans LB400 chromosome 2, complete sequenceXylose isomerase1e-101370
NC_014837:33014:5554855548568701323Pantoea sp. At-9b chromosome, complete genomexylose isomerase1e-101370
NC_018644:637497:6408766408766421831308Alpha proteobacterium HIMB59 chromosome, complete genomeD-xylose isomerase1e-96353
NC_014212:670996:6832496832496844121164Meiothermus silvanus DSM 9946 chromosome, complete genomexylose isomerase4e-26119
NC_008010:321561:3369283369283381391212Deinococcus geothermalis DSM 11300 plasmid 1, complete sequenceXylose isomerase3e-25116
NC_007333:1743890:1850605185060518517621158Thermobifida fusca YX, complete genomexylose isomerase9e-21101
NC_016023:915178:920915920915921250336Bacillus coagulans 36D1 chromosome, complete genomexylose isomerase3e-20100
NC_010407:151599:1653021653021664951194Clavibacter michiganensis subsp. sepedonicus chromosome, completexylose isomerase1e-1997.8
NC_014246:1787154:1792799179279917939651167Mobiluncus curtisii ATCC 43063 chromosome, complete genomexylose isomerase4e-1996.3
NC_007644:2099878:2114823211482321159651143Moorella thermoacetica ATCC 39073, complete genomeXylose isomerase-like TIM barrel2e-0653.9