Pre_GI: BLASTP Hits

Some Help

Query: NC_013929:6371019:6393691 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 6393691, End: 6394449, Length: 759

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003888:4314389:431864843186484319373726Streptomyces coelicolor A3(2), complete genometranscriptional regulator1e-36153
NC_013510:5394432:540096854009685401714747Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, IclR family2e-1066.2
NC_014206:1618988:162671116267111627487777Geobacillus sp. C56-T3 chromosome, complete genomeIclR family transcriptional regulator7e-0960.8
NC_008687:229941:229941229941230696756Paracoccus denitrificans PD1222 chromosome 2, complete sequenceregulatory proteins, IclR9e-0960.8
NC_011961:528837:528837528837529649813Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequencetranscriptional regulator, IclR family1e-0860.5
NC_016860:4024000:403866040386604039412753Salmonella enterica subsp. enterica serovar Typhimurium strputative HTH-type transcriptional regulator yfaX1e-0860.1
NC_014666:1601972:160197216019721602739768Frankia sp. EuI1c chromosome, complete genometranscriptional regulator, IclR family2e-0859.7
NC_006510:1995916:201138620113862012162777Geobacillus kaustophilus HTA426, complete genometranscriptional regulator3e-0858.9
NC_019978:2532640:254798025479802548762783Halobacteroides halobius DSM 5150, complete genometranscriptional regulator5e-0858.5
NC_015565:2027279:204943020494302050236807Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeIclR family transcriptional regulator2e-0756.6
NC_014623:1633889:163496616349661635784819Stigmatella aurantiaca DW4/3-1 chromosome, complete genometranscriptional regulator2e-0756.6
NC_007503:1111457:113341811334181134203786Carboxydothermus hydrogenoformans Z-2901, complete genometranscriptional regulator, IclR family3e-0755.5
NC_011830:4645453:465649246564924657265774Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, IclR family4e-0755.5
NC_008699:2260606:228254222825422283318777Nocardioides sp. JS614, complete genomeregulatory proteins, IclR4e-0755.1
NC_010718:1229355:122935512293551230158804Natranaerobius thermophilus JW/NM-WN-LF, complete genometranscriptional regulator, IclR family5e-0755.1
NC_007644:362000:379800379800380564765Moorella thermoacetica ATCC 39073, complete genometranscriptional regulator, IclR family5e-0755.1
NC_008043:499399:513488513488514279792Silicibacter sp. TM1040 mega plasmid, complete sequencetranscriptional regulator, IclR family4e-0652
NC_015589:2447132:244890124489012449674774Desulfotomaculum ruminis DSM 2154 chromosome, complete genometranscriptional regulator IclR5e-0651.6