Pre_GI: BLASTP Hits

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Query: NC_013890:1175931:1179941 Dehalococcoides sp. GT chromosome, complete genome

Start: 1179941, End: 1180570, Length: 630

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: Temp: Mesophile; Habitat: Fresh water, Groundwater. Dehalococcoides sp. GT was isolated from an chloroethene-contaminated aquifer. This strain can dechlorinate trichloroethene and vinyl chloride. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007356:1165760:120409112040911204720630Dehalococcoides sp. CBDB1, complete genomeputative CRISPR-associated protein2e-120431
NC_007775:723925:734975734975735607633Synechococcus sp. JA-3-3Ab, complete genomeCRISPR-associated protein, Cse3 family1e-29129
NC_008609:2518993:252739825273982528072675Pelobacter propionicus DSM 2379, complete genomeCRISPR-associated protein, Cse3 family8e-25113
NC_015387:942974:957719957719958339621Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeCRISPR-associated protein, Cse3 family1e-23109
NC_018720:1812000:181560918156091816298690Bifidobacterium asteroides PRL2011 chromosome, complete genomeCRISPR-associated protein, Cse3 family9e-23106
NC_015170:54000:665796657967226648Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequenceCRISPR-associated protein, Cse3 family1e-22106
NC_017186:6395435:644496964449696445619651Amycolatopsis mediterranei S699 chromosome, complete genomeCRISPR-associated CSE3 family protein4e-2098.2
NC_014318:6395392:644492564449256445575651Amycolatopsis mediterranei U32 chromosome, complete genomeCRISPR-associated CSE3 family protein4e-2098.2
NC_012590:977920:990914990914991606693Corynebacterium aurimucosum ATCC 700975, complete genomeCRISPR-associated protein2e-1685.5
NC_010610:795975:813168813168813842675Lactobacillus fermentum IFO 3956, complete genomehypothetical protein2e-1685.5
NC_015389:481282:493873493873494562690Coriobacterium glomerans PW2 chromosome, complete genomeCRISPR-associated protein, Cse3 family1e-1583.2
NC_014727:798191:816894816894817517624Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,crispr-associated protein2e-1582.4
NC_008054:745704:761596761596762219624Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completehypothetical protein2e-1582.4
NC_008529:735233:753740753740754363624Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeCRISPR-associated protein2e-1582.4
NC_013131:4422000:442939544293954430105711Catenulispora acidiphila DSM 44928, complete genomeCRISPR-associated protein, Cse3 family2e-1582
NC_009800:2889928:289702128970212897620600Escherichia coli HS, complete genomeCRISPR-associated protein, Cse3 family5e-1581.3
NC_019673:1988853:203734320373432038008666Saccharothrix espanaensis DSM 44229 complete genomeCRISPR-associated Cse3 family protein5e-1581.3
AC_000091:2872000:287844428784442879043600Escherichia coli W3110 DNA, complete genomehypothetical protein2e-1478.6
NC_010473:2963951:297035229703522970951600Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein2e-1478.6
NC_000913:2873443:287781028778102878409600Escherichia coli K12, complete genomehypothetical protein2e-1478.6
NC_012759:2757826:276362227636222764221600Escherichia coli BW2952 chromosome, complete genomehypothetical protein2e-1478.6
NC_016109:603829:615161615161615928768Kitasatospora setae KM-6054, complete genomeputative CRISPR-associated protein3e-1478.2
NC_006361:4574536:458588845858884586562675Nocardia farcinica IFM 10152, complete genomehypothetical protein4e-1478.2
NC_010468:1029471:104301210430121043611600Escherichia coli ATCC 8739, complete genomeCRISPR-associated protein, Cse3 family4e-1477.8
NC_015434:2527412:252741225274122528089678Verrucosispora maris AB-18-032 chromosome, complete genomeCRISPR-associated Cse3 family protein1e-1376.3
NC_008526:343445:354352354352354999648Lactobacillus casei ATCC 334, complete genomeCRISPR-associated protein2e-1375.9
NC_013510:3117837:313535531353553136044690Thermomonospora curvata DSM 43183, complete genomeCRISPR-associated protein, Cse3 family3e-1375.1
NC_015737:2146953:215889821588982159530633Clostridium sp. SY8519, complete genomehypothetical protein2e-1272.4
NC_014210:1588426:159287215928721593591720Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,CRISPR-associated protein, Cse3 family6e-1270.9
NC_015676:1663700:167048916704891671172684Methanosalsum zhilinae DSM 4017 chromosome, complete genomeCRISPR-associated protein, Cse3 family7e-1270.5
NC_007333:1743890:183983018398301840453624Thermobifida fusca YX, complete genomeCRISPR-associated CT1974 family protein1e-1170.1
NC_002939:1505701:151871115187111519319609Geobacter sulfurreducens PCA, complete genomeCRISPR-associated CT1974 family protein1e-1169.7
NC_007164:775000:778422778422779096675Corynebacterium jeikeium K411, complete genomehypothetical protein4e-1168.2
NC_011894:5468500:549560154956015496332732Methylobacterium nodulans ORS 2060, complete genomeCRISPR-associated protein, Cse3 family2e-1065.5
NC_013851:759500:764003764003764632630Allochromatium vinosum DSM 180 chromosome, complete genomeCRISPR-associated protein, Cse3 family4e-1064.7
NC_012912:1053618:105628810562881056935648Dickeya zeae Ech1591, complete genomeCRISPR-associated protein, Cse3 family7e-1063.9
NC_015951:107360:108626108626109270645Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, completeCRISPR-associated protein, Cse3 family1e-0963.5
NC_002932:1851070:187369818736981874327630Chlorobium tepidum TLS, complete genomehypothetical protein3e-0962
NC_008278:514600:526796526796527632837Frankia alni ACN14a, complete genomehypothetical protein1e-0860.1
NC_007333:1743890:183036718303671831065699Thermobifida fusca YX, complete genomehypothetical protein8e-0857
NC_014355:1461355:147334514733451474043699Candidatus Nitrospira defluvii, complete genomeCRISPR-associated protein Cse31e-0653.5