Pre_GI: BLASTP Hits

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Query: NC_013890:1175931:1178807 Dehalococcoides sp. GT chromosome, complete genome

Start: 1178807, End: 1179130, Length: 324

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: Temp: Mesophile; Habitat: Fresh water, Groundwater. Dehalococcoides sp. GT was isolated from an chloroethene-contaminated aquifer. This strain can dechlorinate trichloroethene and vinyl chloride. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007775:723925:733729733729734001273Synechococcus sp. JA-3-3Ab, complete genomeCRISPR-associated protein Cas21e-1892
NC_015387:942974:959279959279959635357Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeCRISPR-associated protein Cas22e-1890.9
NC_015170:54000:682046820468518315Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequenceCRISPR-associated protein Cas22e-1580.9
NC_013510:3117837:313699131369913137341351Thermomonospora curvata DSM 43183, complete genomeCRISPR-associated protein Cas23e-1477.4
NC_013131:4422000:442805844280584428408351Catenulispora acidiphila DSM 44928, complete genomeCRISPR-associated protein Cas22e-1374.3
NC_010468:1029471:104454610445461044830285Escherichia coli ATCC 8739, complete genomeCRISPR-associated protein Cas26e-1372.8
AC_000091:2872000:287722528772252877509285Escherichia coli W3110 DNA, complete genomehypothetical protein9e-1372.4
NC_010473:2963951:296913329691332969417285Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein9e-1372.4
NC_000913:2873443:287659128765912876875285Escherichia coli K12, complete genomehypothetical protein9e-1372.4
NC_012759:2757826:276240327624032762687285Escherichia coli BW2952 chromosome, complete genomehypothetical protein9e-1372.4
NC_013851:759500:762462762462762752291Allochromatium vinosum DSM 180 chromosome, complete genomeCRISPR-associated protein Cas28e-1372.4
NC_008529:735233:755313755313756185873Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, complete3'-5' exonuclease with to CRISPR-associated protein from COG13432e-1270.9
NC_014727:798191:818467818467819339873Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,3'-5' exonuclease with to crispr-associated protein3e-1270.9
NC_008054:745704:763169763169764041873Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completehypothetical protein3e-1270.9
NC_014210:1588426:159457515945751594925351Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,CRISPR-associated protein Cas23e-1270.5
NC_008526:343445:355948355948356853906Lactobacillus casei ATCC 334, complete genome3'-5' exonuclease and CRISPR-associated protein cas24e-1270.1
NC_009654:3980289:399807939980793998369291Marinomonas sp. MWYL1, complete genomeCRISPR-associated Cas2 family protein4e-1270.1
NC_012590:977920:992541992541992897357Corynebacterium aurimucosum ATCC 700975, complete genomeCRISPR-associated protein4e-1270.1
NC_016109:603829:613848613848614126279Kitasatospora setae KM-6054, complete genomeputative CRISPR-associated protein9e-1268.9
NC_013850:985331:998591998591998884294Klebsiella variicola At-22 chromosome, complete genomeCRISPR-associated protein Cas22e-1167.8
NC_018720:1812000:181424018142401814623384Bifidobacterium asteroides PRL2011 chromosome, complete genomeCRISPR-associated protein Cas22e-1167.8
NC_008278:514600:528638528638528904267Frankia alni ACN14a, complete genomehypothetical protein2e-1064.3
NC_014355:1461355:147496914749691475283315Candidatus Nitrospira defluvii, complete genomeCRISPR-associated protein Cas23e-1063.9
NC_015737:2146953:216048921604892161424936Clostridium sp. SY8519, complete genomeDNA polymerase III subunit alpha4e-1063.5
NC_002939:1505701:152147015214701521775306Geobacter sulfurreducens PCA, complete genomeCRISPR-associated CT1978 family protein1e-0961.6
NC_019673:1988853:203602620360262036379354Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein2e-0960.8
NC_015389:481282:495651495651496013363Coriobacterium glomerans PW2 chromosome, complete genomeCRISPR-associated protein Cas22e-0960.8
NC_011894:5468500:549436854943685494646279Methylobacterium nodulans ORS 2060, complete genomeCRISPR-associated protein Cas27e-0959.3
NC_015676:1663700:166929016692901669586297Methanosalsum zhilinae DSM 4017 chromosome, complete genomeCRISPR-associated protein Cas21e-0858.9
NC_007643:185135:200012200012200293282Rhodospirillum rubrum ATCC 11170, complete genomeCRISPR-associated protein, Cas21e-0858.5
NC_008609:2518993:252314125231412523437297Pelobacter propionicus DSM 2379, complete genomeCRISPR-associated protein Cas24e-0857
NC_015434:2527412:252905425290542529464411Verrucosispora maris AB-18-032 chromosome, complete genomeCRISPR-associated Cas2 family protein6e-0752.8
NC_016786:2235731:224996022499602250274315Corynebacterium diphtheriae HC01 chromosome, complete genomeCRISPR-associated protein8e-0752.4
NC_016782:2235000:224936122493612249675315Corynebacterium diphtheriae 241 chromosome, complete genomeCRISPR-associated protein8e-0752.4
NC_002935:2292835:230568923056892306003315Corynebacterium diphtheriae NCTC 13129, complete genomehypothetical protein8e-0752.4