Pre_GI: BLASTP Hits

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Query: NC_013716:357928:365395 Citrobacter rodentium ICC168, complete genome

Start: 365395, End: 366687, Length: 1293

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013364:2898964:2904160290416029054821323Escherichia coli O111:H- str. 11128, complete genomeT3SS secreted effector NleA-like protein0714
NC_011601:1466496:1473581147358114749031323Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeT3SS secreted effector NleA/EspI-like protein0711
NC_002695:1794635:1801541180154118028661326Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein0708
NC_002655:2264773:2284311228431122856361326Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by cryptic prophage CP-933P0708
NC_011353:1716037:1723132172313217244571326Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeNleA11 protein0708
NC_013008:1715831:1722107172210717234321326Escherichia coli O157:H7 str. TW14359 chromosome, complete genomenon-LEE-encoded type III effector0708
NC_013353:867869:8794768794768807141239Escherichia coli O103:H2 str. 12009, complete genomeT3SS effector NleA0641
AP010958:867869:8794768794768807141239Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS secreted effector NleA/EspI-homolog0641
NC_013361:1754346:1763111176311117641241014Escherichia coli O26:H11 str. 11368 chromosome, complete genome1e-152539
NC_013941:1613595:162158416215841621991408Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeNleA8-2 protein3e-37156
NC_013361:1754346:176411517641151764435321Escherichia coli O26:H11 str. 11368 chromosome, complete genome4e-34145