Pre_GI: BLASTP Hits

Some Help

Query: NC_013716:1178383:1202340 Citrobacter rodentium ICC168, complete genome

Start: 1202340, End: 1202672, Length: 333

Host Lineage: Citrobacter rodentium; Citrobacter; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Citrobacter rodentium is the causative agent of transmissible murine colonic hyperplasia in mice. This disease is characterized by a hyperproliferation of the epithelial cells in the colon similar to that found in humans suffering from idiopathic inflammatory bowel disease. In addition this organism contains virulence factors similar to those found in enterohemorrhagic Escherichia coli and enteropathogenic E. coli. C. rodentium are being used as models for studying mucosal response to infection, colon tumor production, and virulence associated with pathogenic E. coli.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016860:1205282:122973412297341230159426Salmonella enterica subsp. enterica serovar Typhimurium strputative autoagglutination protein4e-42169
NC_017046:1164176:118836011883601188686327Salmonella enterica subsp. enterica serovar Typhimurium str. 798curli prooduction protein6e-42169
NC_016863:1165232:118960011896001189926327Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative autoagglutination protein6e-42169
NC_003197:1207597:123214712321471232473327Salmonella typhimurium LT2, complete genomeputative curli production protein precursor6e-42169
NC_011080:1209935:123393412339341234260327Salmonella enterica subsp. enterica serovar Newport str. SL254,curli production protein CsgC6e-42169
NC_003198:1117687:114242311424231142749327Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein4e-41166
NC_006905:1186895:121224412122441212558315Salmonella enterica subsp. enterica serovar Choleraesuis strputative curli production protein4e-40163
NC_004337:1065609:108226610822661082598333Shigella flexneri 2a str. 301, complete genomeputative curli production protein8e-39158
AC_000091:1083798:110520211052021105534333Escherichia coli W3110 DNA, complete genomepredicted curli production protein2e-38157
NC_000913:1087062:110418411041841104516333Escherichia coli K12, complete genomepredicted curli production protein2e-38157
NC_014121:2629075:263984226398422640174333Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completecurli production protein1e-34145
NC_016514:1701273:171006117100611710393333Enterobacter cloacae EcWSU1 chromosome, complete genomeCurli assembly protein CsgC3e-33140
NC_015968:1709680:172024317202431720575333Enterobacter asburiae LF7a chromosome, complete genomeCurli production protein CsgC5e-30129