Pre_GI: BLASTP Hits

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Query: NC_013410:2519441:2532096 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 2532096, End: 2533853, Length: 1758

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012108:3391190:3393345339334533953962052Desulfobacterium autotrophicum HRM2, complete genomehypothetical protein8e-21102
NC_010102:2322866:2330416233041623323651950Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-20101
NC_011147:2085241:2092058209205820940071950Salmonella enterica subsp. enterica serovar Paratyphi A strglycosyl transferase family protein4e-20100
NC_006511:2090058:2096875209687520988241950Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative glycosyl transferase4e-20100
NC_011080:780850:7963337963337982821950Salmonella enterica subsp. enterica serovar Newport str. SL254,putative glycosyl transferase4e-20100
NC_003197:776238:7917767917767936711896Salmonella typhimurium LT2, complete genomeputative glycosyl transferase1e-1998.6
NC_016810:775649:7911877911877930821896Salmonella enterica subsp. enterica serovar Typhimurium strputative glycosyl transferase1e-1998.6
NC_016856:776735:7922737922737941681896Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative glycosyl transferase1e-1998.6
NC_016863:776734:7922727922727941671896Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative glycosyl transferase1e-1998.6
NC_011083:824659:8401318401318420801950Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative glycosyl transferase1e-1998.6
NC_016857:775649:7911337911337930821950Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative glycosyl transferase1e-1998.6
NC_016860:816000:8305528305528325011950Salmonella enterica subsp. enterica serovar Typhimurium strputative glycosyl transferase1e-1998.6
NC_017046:775636:7911197911197930681950Salmonella enterica subsp. enterica serovar Typhimurium str. 798glycosyl transferase1e-1998.6
NC_011094:842038:8574718574718594201950Salmonella enterica subsp. enterica serovar Schwarzengrund strglycosyl transferase family protein2e-1998.2
NC_011745:3511600:3520436352043635238883453Escherichia coli ED1a chromosome, complete genomeputative hydrolase1e-1895.5
NC_015731:447411:4582264582264600641839Nitrosomonas sp. Is79A3 chromosome, complete genomeHaloacid dehalogenase domain-containing protein hydrolase1e-1792
NC_012781:2608840:2626898262689826289192022Eubacterium rectale ATCC 33656, complete genomehypothetical protein6e-1789.7
NC_002163:1354215:1366422136642213695173096Campylobacter jejuni subsp. jejuni NCTC 11168, complete genomeputative sugar transferase3e-1687
NC_012560:1564500:1576965157696515788031839Azotobacter vinelandii DJ, complete genomehydrolase (HAD superfamily) protein1e-1482
NC_021150:1564229:1576978157697815788161839Azotobacter vinelandii CA6, complete genomehydrolase (HAD superfamily) protein1e-1482
NC_009051:165102:1762941762941781201827Methanoculleus marisnigri JR1, complete genomehydrolase (HAD superfamily)-like protein7e-1479.3
NC_010125:3467379:3476784347678434785501767Gluconacetobacter diazotrophicus PAl 5, complete genomehypothetical protein7e-1479.3
NC_011985:3892630:3902649390264939044571809Agrobacterium radiobacter K84 chromosome 1, complete genomehydrolase (HAD superfamily)3e-1377
NC_018012:121793:1337301337301361382409Thiocystis violascens DSM 198 chromosome, complete genomehypothetical protein2e-1274.3
NC_003198:751779:7669757669757684511477Salmonella enterica subsp. enterica serovar Typhi str. CT18,1e-1172
NC_009615:1553556:156663315666331567376744Parabacteroides distasonis ATCC 8503 chromosome, complete genomehypothetical protein1e-1068.2
NC_019897:4131337:4145135414513541474262292Thermobacillus composti KWC4 chromosome, complete genomehypothetical protein4e-0963.5
NC_018012:121793:1361651361651374961332Thiocystis violascens DSM 198 chromosome, complete genomehypothetical protein4e-0757
NC_013410:1152188:1189653118965311914281776Fibrobacter succinogenes subsp. succinogenes S85 chromosome,haloacid dehalogenase domain-containing protein hydrolase8e-0755.8