Pre_GI: BLASTP Hits

Some Help

Query: NC_013410:1651000:1701656 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 1701656, End: 1703164, Length: 1509

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015579:53500:6991669916713941479Novosphingobium sp. PP1Y plasmid Lpl, complete sequencephosphomannomutase1e-136487
NC_014006:2999500:3000702300070230021951494Sphingobium japonicum UT26S chromosome 1, complete genomephosphomannomutase7e-131468
NC_013851:3166969:3183373318337331848541482Allochromatium vinosum DSM 180 chromosome, complete genomephosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II2e-126453
NC_012968:1108687:1111271111127111127221452Methylotenera mobilis JLW8, complete genomephosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I3e-116419
NC_014935:1389000:1404134140413414055491416Nitratifractor saLSUginis DSM 16511 chromosome, complete genomephosphoglucomutase/phosphomannomutase alpha/beta/alpha domain i4e-115415
NC_005139:343500:3614983614983629071410Vibrio vulnificus YJ016 chromosome I, complete sequencephosphomannomutase3e-114412
NC_012968:1945614:1952347195234719538641518Methylotenera mobilis JLW8, complete genomePhosphomannomutase5e-112405
NC_016613:221476:2394292394292408681440Vibrio sp. EJY3 chromosome 1, complete sequencephosphomannomutase1e-111404
NC_009783:670449:6936406936406950581419Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein9e-110397
NC_009665:3460906:3467870346787034692941425Shewanella baltica OS185 chromosome, complete genomephosphoglucomutase/phosphomannomutase subunit alpha/beta3e-109396
NC_014012:1676983:1683330168333016847541425Shewanella violacea DSS12, complete genomephosphomannomutase1e-107390
NC_016613:221476:2658222658222672401419Vibrio sp. EJY3 chromosome 1, complete sequencephosphomannomutase1e-106387
NC_008321:1523323:1540244154024415416621419Shewanella sp. MR-4, complete genomephosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I1e-105383
NC_011751:2395882:2406712240671224081751464Escherichia coli UMN026 chromosome, complete genomePhosphomannomutase (PMM)2e-104380
NC_011080:2161696:2171142217114221725781437Salmonella enterica subsp. enterica serovar Newport str. SL254,phosphomannomutase2e-100366
NC_016832:861956:8832358832358846681434Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,phosphomannomutase2e-98359
NC_004631:862002:8832818832818847141434Salmonella enterica subsp. enterica serovar Typhi Ty2, completephosphomannomutase2e-98359
NC_003198:2109775:2119214211921421206471434Salmonella enterica subsp. enterica serovar Typhi str. CT18,phosphomannomutase2e-98359
NC_011147:854730:8759308759308773631434Salmonella enterica subsp. enterica serovar Paratyphi A strphosphomannomutase3e-98359
NC_006511:854785:8817558817558831881434Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCphosphomannomutase3e-98359
NC_011274:2147427:2156863215686321582961434Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91phosphomannomutase1e-97357
NC_011149:2110861:2120299212029921217321434Salmonella enterica subsp. enterica serovar Agona str. SL483,putative phosphomannomutase2e-97356
NC_016831:854973:8762558762558776881434Salmonella enterica subsp. enterica serovar Gallinarum/pullorumphosphomannomutase2e-97356
NC_011083:2200613:2210052221005222114851434Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative phosphomannomutase5e-97355
NC_003197:2152994:2162433216243321638661434Salmonella typhimurium LT2, complete genomephosphomannomutase5e-97355
NC_010102:861860:8819338819338833661434Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-97355
NC_011294:2156425:2165861216586121672941434Salmonella enterica subsp. enterica serovar Enteritidis strphosphomannomutase5e-97355
NC_016810:2150709:2160148216014821615811434Salmonella enterica subsp. enterica serovar Typhimurium strphosphomannomutase5e-97355
NC_016856:2204546:2213985221398522154181434Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sphosphomannomutase5e-97355
NC_016857:2150709:2160148216014821615811434Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74phosphomannomutase5e-97355
NC_016860:2148535:2157974215797421594071434Salmonella enterica subsp. enterica serovar Typhimurium strphosphomannomutase5e-97355
NC_016863:2152739:2162178216217821636111434Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1phosphomannomutase5e-97355
NC_017046:2150072:2159511215951121609441434Salmonella enterica subsp. enterica serovar Typhimurium str. 798phosphomannomutase5e-97355
NC_011205:2283438:2292877229287722943101434Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853phosphomannomutase3e-97355
NC_011094:2172271:2181711218171121831441434Salmonella enterica subsp. enterica serovar Schwarzengrund strphosphomannomutase3e-97355
NC_009505:531000:5511375511375525401404Brucella ovis ATCC 25840 chromosome I, complete sequenceputative phosphomannomutase2e-95350
NC_016778:515525:5236615236615250641404Brucella canis HSK A52141 chromosome 1, complete sequencephosphomannomutase1e-95350
NC_003317:1443874:1452056145205614534291374Brucella melitensis 16M chromosome I, complete sequencePHOSPHOMANNOMUTASE3e-93342
NC_017246:528825:5499725499725513271356Brucella melitensis M5-90 chromosome chromosome I, completephosphomannomutase2e-92339
NC_017244:529500:5497255497255510801356Brucella melitensis M28 chromosome chromosome 1, complete sequencePhosphomannomutase2e-92339
NC_010742:529500:5495705495705509251356Brucella abortus S19 chromosome 1, complete sequencePhosphomannomutase9e-92337
NC_016795:1857296:1865478186547818668331356Brucella abortus A13334 chromosome 1, complete sequencephosphomannomutase9e-92337
NC_006932:531000:5512545512545526091356Brucella abortus biovar 1 str. 9-941 chromosome I, completephosphomannomutase, hypothetical2e-90333
NC_010169:527500:5476885476885490251338Brucella suis ATCC 23445 chromosome I, complete sequencePhosphomannomutase6e-89328
NC_010103:507482:5283455283455296821338Brucella canis ATCC 23365 chromosome I, complete sequencePhosphomannomutase5e-89328
NC_004310:508483:5297025297025310391338Brucella suis 1330 chromosome I, complete sequencephosphomannomutase, putative5e-89328
NC_013119:511500:5318255318255331621338Brucella microti CCM 4915 chromosome 1, complete sequencephosphomannomutase5e-89328
NC_016797:508414:5296335296335309701338Brucella suis VBI22 chromosome I, complete sequencephosphomannomutase5e-89328
NC_017251:508469:5296885296885310251338Brucella suis 1330 chromosome I, complete genomephosphomannomutase5e-89328
NC_002678:6232000:6252229625222962536801452Mesorhizobium loti MAFF303099, complete genomenodulation protein noeK, phosphomannomutase9e-87321
NC_019973:5069499:5069499506949950709651467Mesorhizobium australicum WSM2073, complete genomephosphomannomutase2e-85317
NC_012441:529500:5498065498065510951290Brucella melitensis ATCC 23457 chromosome I, complete sequencephosphomannomutase1e-85317
NC_007618:526400:5476155476155489041290Brucella melitensis biovar Abortus 2308 chromosome I, completePhosphoglucomutase/phosphomannomutase:Phosphoglu c omutase/phosphomannomutase alpha/beta/alpha domain I:Phosphoglucomutase/phos...5e-85315
NC_018000:3009864:3022541302254130239921452Sinorhizobium fredii USDA 257 chromosome, complete genomephosphomannomutase NoeK2e-81303
NC_009620:1307932:1312947131294713144461500Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequencephosphoglucomutase/phosphomannomutase alpha/beta/subunit2e-77290
NC_017248:529500:5500415500415511411101Brucella melitensis NI chromosome chromosome I, complete sequencephosphomannomutase7e-75281
NC_000961:828416:8316308316308329971368Pyrococcus horikoshii OT3, complete genomephospho-sugar mutase4e-1480.1
NC_015676:1736375:1774504177450417758051302Methanosalsum zhilinae DSM 4017 chromosome, complete genomephosphoglucosamine mutase2e-1377.4
NC_009617:234782:2380132380132393591347Clostridium beijerinckii NCIMB 8052 chromosome, complete genomephosphoglucosamine mutase8e-1375.5
NC_011978:493800:4966244966244979101287Thermotoga neapolitana DSM 4359, complete genomePhosphoglucosamine mutase2e-1274.3
NC_003551:860862:8769578769578783271371Methanopyrus kandleri AV19, complete genomePhosphomannomutase2e-1274.3
NC_021184:592501:6038606038606051941335Desulfotomaculum gibsoniae DSM 7213, complete genomephosphoglucosamine mutase3e-1273.6
NC_000868:1168819:1189702118970211910721371Pyrococcus abyssi GE5, complete genomephosphomannomutase (pmm)9e-1168.9
NC_015574:391869:4018984018984033251428Methanobacterium sp. SWAN-1 chromosome, complete genomephosphoglucosamine mutase1e-1068.2
NC_010723:298954:3019093019093032521344Clostridium botulinum E3 str. Alaska E43, complete genomephosphoglucosamine mutase4e-1066.6
NC_007681:1455425:1463928146392814652861359Methanosphaera stadtmanae DSM 3091, complete genomepredicted phosphomannomutase9e-1065.5
NC_017095:1461520:1469665146966514709691305Fervidobacterium pennivorans DSM 9078 chromosome, complete genomephosphoglucosamine mutase3e-0963.9
NC_015958:2206032:2223290222329022246331344Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomephosphoglucosamine mutase6e-0962.8
NC_009922:2556033:2557984255798425593331350Alkaliphilus oremlandii OhILAs, complete genomephosphoglucosamine mutase1e-0862
NC_014254:18193:2767127671289751305Methanohalobium evestigatum Z-7303 plasmid pMETEV01, completephosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I1e-0862
NC_011653:1728000:1734085173408517353771293Thermosipho africanus TCF52B, complete genomephosphoglucosamine mutase3e-0860.5
NC_011134:1222739:1242488124248812438401353Streptococcus equi subsp. zooepidemicus str. MGCS10565, completephosphoglucosamine mutase GlmM6e-0859.3
NC_004193:241480:2541222541222554621341Oceanobacillus iheyensis HTE831, complete genomephosphoglucomutase6e-0859.3
NC_014538:1942500:1942707194270719440501344Thermoanaerobacter sp. X513 chromosome, complete genomephosphoglucosamine mutase9e-0858.9
NC_015555:386000:3970303970303983731344Thermoanaerobacterium xylanolyticum LX-11 chromosome, completephosphoglucosamine mutase1e-0758.5
NC_007498:1148249:1174000117400011753821383Pelobacter carbinolicus DSM 2380, complete genomephosphohexomutase8e-0755.8
NC_009617:648000:6590706590706606351566Clostridium beijerinckii NCIMB 8052 chromosome, complete genomephosphomannomutase1e-0655.1
NC_012691:3126500:3131020313102031323571338Tolumonas auensis DSM 9187, complete genomephosphoglucosamine mutase2e-0654.3
NC_010001:473354:4771024771024784481347Clostridium phytofermentans ISDg, complete genomephosphoglucosamine mutase2e-0654.3
NC_019814:320260:3366583366583380101353Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonasphosphoglucosamine mutase2e-0654.3
NC_010524:3094303:3100393310039331017271335Leptothrix cholodnii SP-6, complete genomephosphoglucosamine mutase4e-0653.1