Pre_GI: BLASTP Hits

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Query: NC_013410:1152188:1155822 Fibrobacter succinogenes subsp. succinogenes S85 chromosome,

Start: 1155822, End: 1156604, Length: 783

Host Lineage: Fibrobacter succinogenes; Fibrobacter; Fibrobacteraceae; Fibrobacterales; Fibrobacteres; Bacteria

General Information: Temp: Mesophile; Temp: 37C; Habitat: Host. Cellulolytic rumen bacterium. This bacterium is one of the three most predominant cellulolytic organisms in the rumen. Since cellulose is one of the most abundant carbohydrates on the planet, this organism is, therefore, an important part of the global carbon biogeochemical cycle, converting the mass of fixed carbon generated by photosynthetic organisms back to products that eventually end up as carbon dioxide. Increasing cellulose degradation is an important goal in industrial processes. This organism is highly specialized for cellulose degradation, and is only capable of utilizing cellulose and cellulolytic degradation products as carbon sources. Access to cellulose is a rate-liming step in degradation, and the cellulolytic organisms have devised a number of mechanisms for improving access to this insoluble substrate, one of which is the production of surface-localized cellulases. The active enzymes are cell wall associated, but the presence of cellulosomes, large multiprotein cellulase complexes, has not been detected in this organism. Adherence is another method used to promote cellulose degradation, and this organism produces an extracellular matrix of glycoprotein glycocalyx which allows attachment to insoluble cellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017030:7557295:757744875774487577774327Corallococcus coralloides DSM 2259 chromosome, complete genomethioredoxin9e-1270.9
NC_015873:790961:806686806686807006321Megasphaera elsdenii DSM 20460, complete genomethioredoxin1e-1170.1
NC_013501:176073:194886194886195233348Rhodothermus marinus DSM 4252, complete genomethioredoxin2e-1066.2
NC_014828:107802:131356131356131679324Ethanoligenens harbinense YUAN-3 chromosome, complete genomethioredoxin6e-1064.7
NC_014973:4630132:466032346603234660652330Geobacter sp. M18 chromosome, complete genomethioredoxin7e-1064.7
NC_015222:1607757:163141016314101631736327Nitrosomonas sp. AL212 chromosome, complete genomethioredoxin2e-0963.2
NC_009665:4675289:469803446980344698360327Shewanella baltica OS185 chromosome, complete genomethioredoxin8e-0961.2
NC_020409:329915:338253338253338573321Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeThioredoxin-18e-0960.8
NC_008702:1094663:110816211081621108488327Azoarcus sp. BH72, complete genomethioredoxin-disulfide reductase1e-0860.5
NC_011899:1926000:193431819343181934638321Halothermothrix orenii H 168, complete genomethioredoxin1e-0860.5
NC_014960:1670778:168546616854661685819354Anaerolinea thermophila UNI-1, complete genomethioredoxin1e-0860.5
NC_007644:1694879:171051817105181710847330Moorella thermoacetica ATCC 39073, complete genomethioredoxin2e-0860.1
NC_008578:2431074:243217524321752432501327Acidothermus cellulolyticus 11B, complete genomethioredoxin2e-0859.3
NC_015681:1201926:121996412199641220287324Thermodesulfatator indicus DSM 15286 chromosome, complete genomethioredoxin3e-0859.3
NC_009925:4864367:487975748797574880080324Acaryochloris marina MBIC11017, complete genomethioredoxin5e-0858.2
NC_011026:2269986:227686222768622277188327Chloroherpeton thalassium ATCC 35110, complete genomethioredoxin8e-0857.8
NC_011884:1998559:201983120198312020169339Cyanothece sp. PCC 7425, complete genomeThioredoxin domain protein8e-0857.8
NC_010475:1671823:169399816939981694321324Synechococcus sp. PCC 7002, complete genomethioredoxin2e-0756.6
NC_008148:2290806:230989923098992310210312Rubrobacter xylanophilus DSM 9941, complete genomethioredoxin2e-0756.6
NC_014828:637523:641268641268641591324Ethanoligenens harbinense YUAN-3 chromosome, complete genomethioredoxin2e-0756.2
NC_015573:1979202:199762919976291997946318Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomethioredoxin3e-0755.8
NC_014654:422013:440049440049440369321Halanaerobium sp. 'sapolanicus' chromosome, complete genomethioredoxin3e-0755.8
NC_011126:555483:555160555160555486327Hydrogenobaculum sp. Y04AAS1, complete genomethioredoxin4e-0755.5
NC_014210:5752651:576142057614205761743324Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,thioredoxin6e-0754.7
NC_007164:2446879:245284724528472453170324Corynebacterium jeikeium K411, complete genomethioredoxin1e-0653.5
NC_013009:809681:818107818107818415309Neorickettsia risticii str. Illinois, complete genomethioredoxin1e-0653.5
NC_008571:3165143:318375931837593184076318Gramella forsetii KT0803, complete genomethioredoxin3e-0652.8
NC_008261:2920999:293669729366972937011315Clostridium perfringens ATCC 13124, complete genomethioredoxin2e-0652.8
NC_015556:515641:536731536731537057327Pseudomonas fulva 12-X chromosome, complete genomethioredoxin3e-0652.4
NC_013929:5135285:514916551491655149497333Streptomyces scabiei 87.22 chromosome, complete genomethioredoxin3e-0652.4
NC_018750:3964784:398081139808113981134324Streptomyces venezuelae ATCC 10712, complete genomeThioredoxin4e-0652
NC_009952:3596399:362359736235973623917321Dinoroseobacter shibae DFL 12, complete genomethioredoxin6e-0651.6
NC_015564:4727630:473037047303704730690321Amycolicicoccus subflavus DQS3-9A1 chromosome, complete genomethioredoxin6e-0651.6
NC_008820:808886:826442826442826765324Prochlorococcus marinus str. MIT 9303, complete genomeThioredoxin7e-0651.2
NC_015590:298063:306845306845307213369Sinorhizobium meliloti AK83 chromosome 1, complete sequencethioredoxin domain-containing protein9e-0650.8
NC_013173:1231213:124439012443901244710321Desulfomicrobium baculatum DSM 4028, complete genomethioredoxin1e-0550.8