Pre_GI Gene

Some Help

Host: NC_010475 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010475:1671823 Synechococcus sp. PCC 7002, complete genome

Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: The cyanobacterium Synechococcus sp. PCC 7002 (formerly known as Agmenellum quadruplicatum strain PR-6) was originally isolated in 1961 by Chase Van Baalen from an onshore, marine mud flat sample derived from fish pens on Maguyes Island, La Parguera, Puerto Rico. The organism grows in brackish (euryhaline/marine) water and is unicellular but tends to form short filaments of two to four cells during exponential growth at the temperature optimum of 38 degrees C. The strain is extremely tolerant of high light intensities and has been grown at light intensities equivalent to two suns. This unique combination of physiological and genetic properties have long made this strain an important model system to studies of the oxygenic photosynthetic apparatus, the regulation of carbon and nitrogen metabolism, and other aspects of cyanobacterial physiology and metabolism.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
167182316734841662metallo-beta-lactamase superfamily domain proteinQuickGO ontologyBLASTP
16734811673795315hypothetical protein
16738801674743864hydrolase alphabeta fold familyQuickGO ontologyBLASTP
16748541675576723hypothetical protein
16758061676318513acetyltransferase GNAT familyQuickGO ontologyBLASTP
1676372167644574tRNA-ProQuickGO ontologyBLASTP
16767881677696909hypothetical proteinBLASTP
16777181678593876methyltransferase methylase of peptide chain release factorsQuickGO ontologyBLASTP
167874816803701623hypothetical proteinBLASTP
16803631680872510hypothetical proteinBLASTP
16808911681433543hypothetical proteinBLASTP
168154416840122469hypothetical proteinBLASTP
16842001684724525hypothetical proteinBLASTP
16848121685270459hypothetical protein
16853941686227834hydrolase alphabeta fold familyQuickGO ontologyBLASTP
168637016874671098phospho-N-acetylmuramoyl-pentapeptide- transferaseQuickGO ontologyBLASTP
168752416893291806penicillin-binding protein 2QuickGO ontologyBLASTP
168942916906041176tyrosyl-tRNA synthetaseQuickGO ontologyBLASTP
16907511691716966porphobilinogen deaminaseQuickGO ontologyBLASTP
16922781692829552acetyltransferase GNAT familyQuickGO ontologyBLASTP
16929481693367420hypothetical protein
16934521693910459hypothetical proteinBLASTP
16939981694321324thioredoxinQuickGO ontologyBLASTP