Pre_GI: BLASTP Hits

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Query: NC_013316:2033906:2054064 Clostridium difficile R20291, complete genome

Start: 2054064, End: 2055515, Length: 1452

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014828:541874:5560295560295574741446Ethanoligenens harbinense YUAN-3 chromosome, complete genome3e-146518
NC_012891:1277966:1292370129237012938541485Streptococcus dysgalactiae subsp. equisimilis GGS_124 chromosome 1,hypothetical protein2e-103376
NC_015977:3424178:3466782346678234680711290Roseburia hominis A2-183 chromosome, complete genomehypothetical protein3e-84312
NC_012781:700226:7232517232517248311581Eubacterium rectale ATCC 33656, complete genomeputative conjugal transfer protein4e-72272
NC_012781:2552723:2573928257392825755081581Eubacterium rectale ATCC 33656, complete genomeputative conjugal transfer protein4e-72272
NC_013316:2033906:2082284208228420835131230Clostridium difficile R20291, complete genomehypothetical protein1e-46187
NC_015603:1:17117122312061Lactobacillus kefiranofaciens ZW3 plasmid pWW2, complete sequencenickase7e-40165
NC_015977:2718437:2735594273559427373151722Roseburia hominis A2-183 chromosome, complete genomeputative conjugal transfer protein5e-39162
NC_015675:5607297:5632354563235456354013048Mesorhizobium opportunistum WSM2075 chromosome, complete genomeTi-type conjugative transfer relaxase TraA6e-39162
NC_008435:1131242:1160526116052611635463021Rhodopseudomonas palustris BisA53, complete genomeMobA/MobL protein2e-38160
NC_010338:359940:3722873722873751452859Caulobacter sp. K31, complete genomeTi-type conjugative transfer relaxase TraA2e-38160
NC_010338:1216385:1217970121797012208282859Caulobacter sp. K31, complete genomeTi-type conjugative transfer relaxase TraA2e-38160
NC_015977:2920500:2926700292670029284211722Roseburia hominis A2-183 chromosome, complete genomeputative conjugal transfer protein6e-38159
NC_017202:56000:7778377783798792097Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT127,Nickase TraA2e-37157
NC_007958:4371125:4393639439363943967583120Rhodopseudomonas palustris BisB5, complete genomeMobA/MobL protein4e-37156
NC_007925:138927:1633911633911664953105Rhodopseudomonas palustris BisB18, complete genomeMobA/MobL protein6e-37155
NC_002678:763808:7856497856497886963048Mesorhizobium loti MAFF303099, complete genomeprobable conjugal transfer protein traA6e-37155
NC_009445:6424000:6443614644361464466253012Bradyrhizobium sp. ORS 278 chromosome, complete genomeconjugal transfer relaxase TraA1e-36154
NC_009720:2945655:2945655294565529485852931Xanthobacter autotrophicus Py2, complete genomeconjugal transfer relaxase TraA1e-36154
NC_009720:251703:2737272737272766572931Xanthobacter autotrophicus Py2, complete genomeconjugal transfer relaxase TraA1e-36154
NC_015675:4565500:4576462457646245795093048Mesorhizobium opportunistum WSM2075 chromosome, complete genomeTi-type conjugative transfer relaxase TraA1e-36154
NC_009445:838281:8382818382818412923012Bradyrhizobium sp. ORS 278 chromosome, complete genomeconjugal transfer relaxase TraA2e-36153
NC_014217:2760898:2762803276280327657602958Starkeya novella DSM 506 chromosome, complete genomeTi-type conjugative transfer relaxase TraA2e-36153
NC_009720:464078:4822914822914852482958Xanthobacter autotrophicus Py2, complete genomeconjugal transfer relaxase TraA3e-36153
NC_007925:1085500:1087177108717710902813105Rhodopseudomonas palustris BisB18, complete genomeMobA/MobL protein9e-36151
NC_007802:3252300:3275866327586632772091344Jannaschia sp. CCS1, complete genomeMobA/MobL protein9e-36151
NC_014217:2020737:2020737202073720236942958Starkeya novella DSM 506 chromosome, complete genomeTi-type conjugative transfer relaxase TraA3e-35150
NC_014006:3124818:3167502316750231703452844Sphingobium japonicum UT26S chromosome 1, complete genomeconjugal transfer protein TraA5e-35149
NC_014816:1592799:1592799159279915960233225Asticcacaulis excentricus CB 48 chromosome 1, complete sequenceti-type conjugative transfer relaxase traa4e-35149
NC_009445:1316000:1316372131637213193262955Bradyrhizobium sp. ORS 278 chromosome, complete genomeconjugal transfer relaxase TraA1e-34148
NC_007296:1073784:1085573108557310868021230Streptococcus pyogenes MGAS6180, complete genomenickase4e-33143
NC_015259:3902136:3902136390213639042412106Polymorphum gilvum SL003B-26A1 chromosome, complete genomeTi-type conjugative transfer relaxase TraA2e-31137
NC_016832:948029:9618499618499633601512Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,MobA/MobL8e-31135
NC_015508:296856:2968562968563006473792Agrobacterium sp. H13-3 chromosome linear, complete sequenceConjugal transfer protein traA7e-31135
NC_016831:947281:9714039714039729231521Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative Conjugal transfer protein6e-31135
NC_011274:2044000:2061616206161620631361521Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91Conjugal transfer protein5e-31135
NC_011294:2053991:2070488207048820720081521Salmonella enterica subsp. enterica serovar Enteritidis strconjugal transfer protein1e-30134
NC_011205:2180598:2197505219750521990251521Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853MobA/MobL family protein1e-30134
NC_004547:1873390:1909271190927119107311461Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeprobable plasmid-related protein6e-30132
NC_011745:2209288:2252468225246822539491482Escherichia coli ED1a chromosome, complete genomeputative mobilization protein1e-29130
NC_011991:65368:6536865368694384071Agrobacterium vitis S4 plasmid pAtS4b, complete sequenceTi-type conjugative transfer relaxase TraA3e-29130
NC_008253:1938975:1954359195435919558611503Escherichia coli 536, complete genomehypothetical protein8e-29128
NC_004431:2185750:2201204220120422027061503Escherichia coli CFT073, complete genomehypothetical protein9e-29128
NC_011149:1987291:2004722200472220062271506Salmonella enterica subsp. enterica serovar Agona str. SL483,MobA/MobL family4e-28126
NC_013716:2139952:2152084215208421535981515Citrobacter rodentium ICC168, complete genomeputative MobA/MobL family mobilization protein6e-28125
NC_010510:339879:3631673631673647441578Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete3e-27123
NC_009656:5505413:5514427551442755156501224Pseudomonas aeruginosa PA7 chromosome, complete genomemobilization protein2e-26120
NC_014727:1485656:149873614987361499374639Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,nickase, traa like protein1e-23111
NC_015224:3587500:360425036042503604741492Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative Conjugal transfer protein5e-23109
NC_010125:2295500:2301968230196823033711404Gluconacetobacter diazotrophicus PAl 5, complete genomeputative mobilization protein A4e-23109
NC_011365:502620:5087915087915101941404Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeMobA/MobL protein4e-23109
NC_004547:3207776:3243722324372232451251404Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative plasmid mobilization protein4e-22106
NC_016026:1224129:1241326124132612434102085Micavibrio aeruginosavorus ARL-13 chromosome, complete genomemobA/MobL family protein4e-2099.8
NC_010688:1192410:1230572123057212321581587Xanthomonas campestris pv. campestris, complete genomeputative conjugal transfer protein1e-1894.7
NC_003919:3812778:3840055384005538416471593Xanthomonas axonopodis pv. citri str. 306, complete genomeplasmid mobilization protein2e-1894.4
NC_010688:3515885:3538586353858635401781593Xanthomonas campestris pv. campestris, complete genomeMobA/MobL family protein4e-1893.2
NC_007508:1221500:1228615122861512306662052Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative MobA/MobL family protein6e-1479.3
NC_010688:3030873:3040681304068130422761596Xanthomonas campestris pv. campestris, complete genomeplasmid mobilization protein6e-1479.3
NC_017271:3641705:3666804366680436684141611Xanthomonas campestris pv. raphani 756C chromosome, completeMobA-MobL family protein2e-1377.8
NC_007508:1221500:1252752125275212543531602Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeMobA/MobL family protein3e-1377
NC_010793:1695716:1704741170474117057571017Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA7e-1272.4
NC_017028:1030000:1046311104631110504474137Candidatus Rickettsia amblyommii str. GAT-30V chromosome, completeconjugal transfer protein TraA3e-1170.1
NC_016010:1822212:1878854187885418804971644Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeplasmid mobilization protein4e-1170.1
NC_009092:1127000:1144881114488111461731293Shewanella loihica PV-4, complete genomeMobA/MobL protein5e-1169.3
NC_017044:702483:7137857137857179214137Rickettsia parkeri str. Portsmouth chromosome, complete genomeconjugal transfer protein TraA1e-1068.6
NC_010793:1468849:1475436147543614782402805Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA3e-1067
NC_017028:1030000:103036510303651031309945Candidatus Rickettsia amblyommii str. GAT-30V chromosome, completeconjugal transfer protein TraA4e-1066.6
NC_009138:668000:685471685471686190720Herminiimonas arsenicoxydans, complete genomeputative plasmid mobilization protein5e-1066.2
NC_003919:1716831:1739162173916217407601599Xanthomonas axonopodis pv. citri str. 306, complete genomeplasmid mobilization protein2e-0964.3
NC_010793:1695716:1698219169821917002312013Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA3e-0963.5
NC_010793:357000:3642693642693655851317Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA4e-0963.5
NC_010793:541040:5689105689105702081299Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraA4e-0963.5
NC_013855:964000:9651729651729682163045Azospirillum sp. B510 plasmid pAB510a, complete sequencehypothetical protein4e-0963.2
NC_010688:3229820:3243901324390132455261626Xanthomonas campestris pv. campestris, complete genomeplasmid mobilization protein2e-0860.8
NC_007086:2887875:2907735290773529093781644Xanthomonas campestris pv. campestris str. 8004, complete genomeplasmid mobilization protein4e-0859.7
NC_012796:1600600:1609788160978816126312844Desulfovibrio magneticus RS-1, complete genomeconjugal transfer protein TraA7e-0858.9
NC_015873:238187:2481432481432502002058Megasphaera elsdenii DSM 20460, complete genomemobA/MobL family protein2e-0757.8