Pre_GI: BLASTP Hits

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Query: NC_013199:2426686:2434141 Lactobacillus rhamnosus Lc 705, complete genome

Start: 2434141, End: 2434917, Length: 777

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013198:2458080:246553224655322466320789Lactobacillus rhamnosus GG, complete genomeresponse regulator, LytR/AlgR family5e-136483
NC_014334:2307950:231601723160172316823807Lactobacillus casei str. Zhang chromosome, complete genomeresponse regulator of the LytR/AlgR family9e-85313
NC_008526:2373190:238419923841992385005807Lactobacillus casei ATCC 334, complete genomeResponse regulator of the LytR/AlgR family1e-84312
NC_010999:2516000:252425525242552525061807Lactobacillus casei, complete genomeResponse regulator1e-84312
NC_014554:337268:366348366348367091744Lactobacillus plantarum subsp. plantarum ST-III chromosome,response regulator PlnD, repressor2e-27122
NC_004567:343500:373896373896374639744Lactobacillus plantarum WCFS1, complete genomeresponse regulator PlnD, repressor2e-27122
NC_004567:343500:373034373034373777744Lactobacillus plantarum WCFS1, complete genomeresponse regulator PlnC, activator2e-22106
NC_014554:337268:365486365486366229744Lactobacillus plantarum subsp. plantarum ST-III chromosome,response regulator PlnC, activator2e-22106
NC_012004:470492:477357477357478097741Streptococcus uberis 0140J, complete genomeresponse regulator protein3e-1582.4
NC_009785:387910:407897407897408631735Streptococcus gordonii str. Challis substr. CH1, complete genomeResponse regulator of the LytR/AlgR family1e-1480.5
NC_002976:1540794:156046715604671561138672Staphylococcus epidermidis RP62A, complete genomeaccessory gene regulator protein A5e-1478.2
NC_014328:3823902:383822538382253838944720Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative response regulator receiver domain-containing protein3e-1375.9
NC_012984:3077004:308966030896603090403744Lactobacillus plantarum JDM1, complete genomeresponse regulator; accesory gene regulator protein A4e-1375.1
NC_020207:2240115:225031622503162251068753Enterococcus faecium NRRL B-2354, complete genomeResponse regulator of the LytR, AlgR family4e-1168.9
NC_014393:1022843:104502710450271045773747Clostridium cellulovorans 743B chromosome, complete genometwo component transcriptional regulator, LytTR family1e-0963.9