Pre_GI: BLASTP Hits

Some Help

Query: NC_013199:2058857:2075963 Lactobacillus rhamnosus Lc 705, complete genome

Start: 2075963, End: 2077354, Length: 1392

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016023:915178:9423349423349437371404Bacillus coagulans 36D1 chromosome, complete genomepolysaccharide biosynthesis protein5e-77288
NC_011653:748844:7557057557057571231419Thermosipho africanus TCF52B, complete genomewzx, putative9e-59228
NC_004307:1108325:1135776113577611372151440Bifidobacterium longum NCC2705, complete genomehypothetical transmembrane protein possibly involved in polysaccharide biosynthesis6e-55215
NC_008618:1729739:1743720174372017451351416Bifidobacterium adolescentis ATCC 15703, complete genomehypothetical transmembrane protein possibly involved in polysaccharide biosynthesis1e-53211
NC_015164:63590:7932779327807421416Bacteroides salanitronis DSM 18170 chromosome, complete genomepolysaccharide biosynthesis protein2e-53210
NC_013204:2826500:2854712285471228561571446Eggerthella lenta DSM 2243, complete genomepolysaccharide biosynthesis protein2e-53209
NC_009615:644757:6571106571106585491440Parabacteroides distasonis ATCC 8503 chromosome, complete genomeexopolysaccharide biosynthesis protein6e-53208
NC_013714:2086526:2135335213533521367771443Bifidobacterium dentium Bd1, complete genomeFlippase1e-52207
NC_014656:1161188:1174401117440111757981398Bifidobacterium longum subsp. longum BBMN68 chromosome, completetransmembrane protein2e-51203
NC_015500:2417041:2424478242447824259021425Treponema brennaborense DSM 12168 chromosome, complete genomepolysaccharide biosynthesis protein1e-49197
NC_012780:242500:2591362591362605601425Eubacterium eligens ATCC 27750 plasmid unnamed, complete sequencehypothetical protein1e-38161
NC_017221:1763914:1793623179362317950231401Bifidobacterium longum subsp. longum KACC 91563 chromosome,transmembrane protein possibly involved in polysaccharide biosynthesis6e-30132
NC_009714:1404000:1418865141886514202801416Campylobacter hominis ATCC BAA-381, complete genomepolysaccharide biosynthesis protein1e-22108
NC_002939:2124642:2151750215175021533061557Geobacter sulfurreducens PCA, complete genomepolysaccharide biosynthesis domain protein2e-1687.8
NC_008609:2643000:2658986265898626604581473Pelobacter propionicus DSM 2379, complete genomepolysaccharide biosynthesis protein3e-1687
NC_014624:1840209:1854056185405618554741419Eubacterium limosum KIST612 chromosome, complete genomepolysaccharide biosynthesis protein3e-1583.6
NC_007645:2779381:2802048280204828035051458Hahella chejuensis KCTC 2396, complete genomeMembrane protein involved in the export of O-antigen and teichoic acid5e-1479.3
NC_009718:643200:6455226455226469611440Fervidobacterium nodosum Rt17-B1, complete genomepolysaccharide biosynthesis protein2e-1377.4
NC_011978:15059:3298232982343791398Thermotoga neapolitana DSM 4359, complete genomePolysaccharide biosynthesis protein3e-1377
NC_008261:551513:5621785621785636441467Clostridium perfringens ATCC 13124, complete genomeputative polysaccharide transporter protein3e-1377
NC_009802:1525144:1537912153791215393061395Campylobacter concisus 13826, complete genomecytosol aminopeptidase1e-1068.2
NC_014624:2478985:2483983248398324853981416Eubacterium limosum KIST612 chromosome, complete genomepolysaccharide biosynthesis protein1e-1067.8
NC_017095:119361:1342241342241356541431Fervidobacterium pennivorans DSM 9078 chromosome, complete genomemembrane protein2e-1067.4
NC_014624:2368078:2375533237553323769631431Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein3e-1067
NC_007969:726086:7384067384067398331428Psychrobacter cryohalolentis K5, complete genomepolysaccharide biosynthesis protein4e-1066.6
NC_016026:997225:1017732101773210191711440Micavibrio aeruginosavorus ARL-13 chromosome, complete genomepolysaccharide biosynthesis family protein5e-1066.2
NC_006347:143876:1747891747891763211533Bacteroides fragilis YCH46, complete genomepolysaccharide biosynthesis protein7e-1065.9
NC_011770:2046490:2059510205951020609341425Pseudomonas aeruginosa LESB58, complete genomehypothetical protein1e-0964.7
NC_014011:1760793:1778877177887717802891413Aminobacterium colombiense DSM 12261 chromosome, complete genomepolysaccharide biosynthesis protein1e-0964.7
NC_008346:800500:8251138251138264051293Syntrophomonas wolfei subsp. wolfei str. Goettingen, completehypothetical protein2e-0964.3
NC_010364:3322:4372243722451641443Halobacterium salinarum R1, complete genomeputative polysaccharide export protein6e-0962.8
NC_002607:3322:4270742707441491443Halobacterium sp. NRC-1, complete genomehypothetical protein6e-0962.8
NC_010475:2537500:2546615254661525479521338Synechococcus sp. PCC 7002, complete genomepolysaccharide biosynthesis export protein2e-0860.8
NC_010003:1360472:1396800139680013982511452Petrotoga mobilis SJ95, complete genomepolysaccharide biosynthesis protein3e-0860.1
NC_013158:1027015:1047312104731210487811470Halorhabdus utahensis DSM 12940, complete genomepolysaccharide biosynthesis protein4e-0859.7
NC_010003:1360472:1390378139037813918291452Petrotoga mobilis SJ95, complete genomepolysaccharide biosynthesis protein4e-0859.7
NC_015707:1614598:1619708161970816211681461Thermotoga thermarum DSM 5069 chromosome, complete genomepolysaccharide biosynthesis protein8e-0858.9
NC_013173:3679326:3689094368909436903501257Desulfomicrobium baculatum DSM 4028, complete genomepolysaccharide biosynthesis protein8e-0858.9
NC_009925:5838500:5851005585100558524381434Acaryochloris marina MBIC11017, complete genomepolysaccharide biosynthesis protein, putative1e-0758.2
NC_009767:997500:1010446101044610119121467Roseiflexus castenholzii DSM 13941, complete genomepolysaccharide biosynthesis protein2e-0757.4
NC_005363:1604337:1624303162430316255711269Bdellovibrio bacteriovorus HD100, complete genomeputative polysaccharide biosynthesis protein CpsL3e-0757
NC_014153:2282725:2290601229060122921241524Thiomonas intermedia K12 chromosome, complete genomepolysaccharide biosynthesis protein3e-0757
NC_000853:648075:6533956533956548341440Thermotoga maritima MSB8, complete genomelipopolysaccharide biosynthesis protein3e-0757
NC_013642:400651:4186864186864201251440Thermotoga naphthophila RKU-10, complete genomepolysaccharide biosynthesis protein3e-0757
NC_016631:1757788:1759741175974117612701530Granulicella mallensis MP5ACTX8 chromosome, complete genomepolysaccharide biosynthesis protein1e-0654.7
NC_018870:271323:2768252768252782611437Thermacetogenium phaeum DSM 12270 chromosome, complete genomepolysaccharide biosynthesis protein2e-0653.9
NC_014484:1690272:1704759170475917058651107Spirochaeta thermophila DSM 6192 chromosome, complete genometransporter9e-0652