Pre_GI: BLASTP Hits

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Query: NC_013198:394000:450928 Lactobacillus rhamnosus GG, complete genome

Start: 450928, End: 451500, Length: 573

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016641:1530905:1534853153485315364841632Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein1e-41169
NC_014724:59000:6403364033652561224Lactobacillus amylovorus GRL 1112 chromosome, complete genomehypothetical protein3e-40164
NC_015214:48999:5482954829560521224Lactobacillus acidophilus 30SC chromosome, complete genomehypothetical protein3e-40164
NC_008054:201075:2271582271582284051248Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completehypothetical protein1e-39162
NC_020272:84227:98453984531000991647Bacillus amyloliquefaciens IT-45, complete genomehypothetical protein5e-36150
NC_008497:1111891:1140528114052811417301203Lactobacillus brevis ATCC 367, complete genomehypothetical protein8e-36149
NC_014106:54587:6024160241614311191Lactobacillus crispatus ST1, complete genomehypothetical protein1e-35149
NC_010610:1178430:1181630118163011833541725Lactobacillus fermentum IFO 3956, complete genomehypothetical protein3e-25114
NC_015428:21724:3735137351390961746Lactobacillus buchneri NRRL B-30929 chromosome, complete genomehypothetical protein1e-24112
NC_008529:1042220:1058092105809210595821491Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completehypothetical protein9e-22103
NC_010816:621849:6322106322106343692160Bifidobacterium longum DJO10A, complete genomehypothetical protein5e-1684.3
NC_017219:1622050:1630552163055216327112160Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein7e-1683.6
NC_017221:1222963:1231594123159412337682175Bifidobacterium longum subsp. longum KACC 91563 chromosome,hypothetical protein7e-1683.6
NC_011593:1622260:1630762163076216329362175Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,hypothetical protein7e-1683.6
NC_015052:1094825:1104130110413011062892160Bifidobacterium longum subsp. infantis 157F, complete genomehypothetical protein1e-1582.8
NC_017098:986428:9928719928719945591689Spirochaeta africana DSM 8902 chromosome, complete genomehypothetical protein2e-1479.3
NC_008618:1206157:1213113121311312152512139Bifidobacterium adolescentis ATCC 15703, complete genomehypothetical protein4e-1374.3
NC_014616:1065500:1075397107539710771271731Bifidobacterium bifidum S17 chromosome, complete genomehypothetical protein4e-1374.3
NC_013714:1376500:1384621138462113871582538Bifidobacterium dentium Bd1, complete genomehypothetical protein1e-1272.8
NC_014298:251783:2727872727872746761890Halalkalicoccus jeotgali B3 plasmid 1, complete sequenceATP/GTP-binding protein2e-1272
NC_014219:2875051:2890708289070828925491842Bacillus selenitireducens MLS10 chromosome, complete genomeProtein of unknown function DUF20754e-1271.2
NC_013714:1521404:1531629153162915334131785Bifidobacterium dentium Bd1, complete genomehypothetical protein5e-1270.9
NC_012673:2064298:2074420207442020763121893Exiguobacterium sp. AT1b, complete genomeAAA ATPase2e-1168.9
NC_006396:2057209:2073736207373620756161881Haloarcula marismortui ATCC 43049 chromosome I, complete sequencereplication factor C2e-1065.5
NC_015738:2652500:2662178266217826638871710Eggerthella sp. YY7918, complete genomehypothetical protein3e-0961.6
NC_018681:2447871:2456294245629424582221929Nocardia brasiliensis ATCC 700358 chromosome, complete genomeAAA ATPase9e-0960.1
NC_020388:1618396:1633490163349016353761887Natronomonas moolapensis 8.8.11 complete genomeprobable ATP/GTP-binding protein1e-0859.7
NC_007963:1190847:1216481121648112188712391Chromohalobacter salexigens DSM 3043, complete genomehypothetical protein2e-0755.5
NC_010501:734363:7458757458757477431869Pseudomonas putida W619, complete genomeATP/GTP-binding protein, putative2e-0755.1
NC_015859:1898693:1910292191029219122531962Corynebacterium variabile DSM 44702 chromosome, complete genomehypothetical protein3e-0755.1
NC_013061:1052957:1080898108089810828051908Pedobacter heparinus DSM 2366, complete genomeATP/GTP-binding protein, putative7e-0753.5
NC_004129:4434259:4444967444496744468411875Pseudomonas fluorescens Pf-5, complete genomeATP/GTP-binding protein, putative1e-0653.1
NC_014391:3445672:3452951345295134548491899Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeAAA ATPase2e-0652.4
NC_002939:1480474:1481813148181314842152403Geobacter sulfurreducens PCA, complete genomehypothetical protein2e-0652.4
NC_014532:2664139:2701341270134127037312391Halomonas elongata DSM 2581, complete genomeK09384 hypothetical protein2e-0652.4